RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 NFIBO00712 420 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 FANCGO15287 622 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 SLITRK3O94933 977 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 GCNT3O95395 438 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 BCRP11274 1271 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 NR2F2P24468 414 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 SPA17Q15506 151 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 NBPF12Q5TAG4 269 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 STXBP4Q6ZWJ1 553 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ZC3H3Q8IXZ2 948 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 SCYL3Q8IZE3 742 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 SLC35F6Q8N357 371 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EHBP1Q8NDI1 1231 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 PIGOQ8TEQ8 1089 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 CLEC4DQ8WXI8 215 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 CCDC42Q96M95 316 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 IRX2Q9BZI1 471 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EDEM3Q9BZQ6 932 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 HOMER2Q9NSB8 354 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 A0A0U1RQJ8 604 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ARHGEF35A5YM69 484 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EIF3CLB5ME19 914 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 PDXKO00764 312 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 KRT86O43790 486 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 MYBP10242 640 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ERCC3P19447 782 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ARHGAP25P42331 645 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 CASP5P51878 434 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ERCC6LQ2NKX8 1250 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 PCNX4Q63HM2 1172 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EPM2AIP1Q7L775 607 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 MIER3Q7Z3K6 550 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 MYCT1Q8N699 235 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ATRIPQ8WXE1 791 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 JAKMIP2Q96AA8 810 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EIF3CQ99613 913 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 OLFML3Q9NRN5 406 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 TYW1Q9NV66 732 aaKnown RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 KCND2Q9NZV8 630 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 GUCA1BQ9UMX6 200 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 FRMPD4Q14CM0 1322 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 RSPH10B2B2RC85 870 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 DDX39AO00148 427 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 NKRFO15226 690 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 EIF3DO15371 548 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 PRPF6O94906 941 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 RSPH10BP0C881 870 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 HNRNPH3P31942 346 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 GHRHRQ02643 423 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 SPP2Q13103 211 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 BMT2Q1RMZ1 405 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 CCDC122Q5T0U0 273 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 ANGEL2Q5VTE6 544 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 TRIM59Q8IWR1 403 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 SMCR8Q8TEV9 937 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 LXNQ9BS40 222 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 TSGA10Q9BZW7 698 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 PARVGQ9HBI0 331 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 PKD2L1Q9P0L9 805 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 SEL1LQ9UBV2 794 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 TCEAL9Q9UHQ7 104 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 REXO2Q9Y3B8 237 aaKnown RBP9.29□□□□□ -0.92
HMGB4-203ENST00000519684 UBE4BO95155 1302 aa9.29□□□□□ -0.92
HMGB4-203ENST00000519684 TADA3O75528 432 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
HMGB4-203ENST00000519684 ITGB5P18084 799 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 BACE1P56817 501 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 HERVK_113P62684 666 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 DGKZQ13574 1117 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 MUM1L1Q5H9M0 696 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 SLC30A10Q6XR72 485 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF662Q6ZS27 426 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 C1orf186Q6ZWK4 172 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 FRMD5Q7Z6J6 570 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 TXLNBQ8N3L3 684 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 CEP112Q8N8E3 955 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF280CQ8ND82 737 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 LRRN4CLQ8ND94 238 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 SYTL5Q8TDW5 730 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-203ENST00000519684 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 ARID3AQ99856 593 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 KCNH7Q9NS40 1196 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 ARGLU1Q9NWB6 273 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-203ENST00000519684 CEP72Q9P209 647 aa9.28□□□□□ -0.92
HMGB4-203ENST00000519684 COL20A1Q9P218 1284 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms