RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 HIP1RO75146 1068 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 POU3F3P20264 500 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 SOX5P35711 763 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 RAP1GAPP47736 663 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 DBPQ10586 325 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 ADAM9Q13443 819 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 RNF187Q5TA31 235 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 C11orf84Q9BUA3 381 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 FAM126AQ9BYI3 521 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-213ENST00000519553 IFT57Q9NWB7 429 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 GAS7O60861 476 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 SDHAP31040 664 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 HERVK_113P62684 666 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 RTP5Q14D33 572 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 DHCR24Q15392 516 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 CATSPEREQ5SY80 951 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 TMC5Q6UXY8 1006 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 STK32CQ86UX6 486 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 OR2W6PQ8NHA6 318 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 FNIP1Q8TF40 1166 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 CHTF18Q8WVB6 975 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPN12-213ENST00000519553 OXSMQ9NWU1 459 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 BTBD7Q9P203 1132 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 PMF1-BGLAPU3KQ54 211 aa8.71□□□□□ -1.02
PTPN12-213ENST00000519553 ZNF839A8K0R7 811 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 NPIPB6E9PJ23 425 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 H7C1D1 291 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 MMEP08473 750 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 AOAHP28039 575 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 ADCYAP1R1P41586 468 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 KIF11P52732 1056 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 DLX2Q07687 328 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-213ENST00000519553 PKN1Q16512 942 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 CC2D1AQ6P1N0 951 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-213ENST00000519553 KIAA1958Q8N8K9 716 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 DTX3Q8N9I9 347 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 PCDH18Q9HCL0 1135 aa8.7□□□□□ -1.02
PTPN12-213ENST00000519553 THG1LQ9NWX6 298 aaKnown RBP8.7□□□□□ -1.02
PTPN12-213ENST00000519553 BPIP17213 487 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 SCNN1BP51168 640 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 TMEM132BQ14DG7 1078 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 VWA3BQ502W6 1294 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 VASNQ6EMK4 673 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 KYQ8NBH2 561 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 DACT3Q96B18 629 aaPredicted RBP8.69□□□□□ -1.02
PTPN12-213ENST00000519553 ZBTB8AQ96BR9 441 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 PWWP2AQ96N64 755 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 TMEM209Q96SK2 561 aa8.69□□□□□ -1.02
PTPN12-213ENST00000519553 FOXP2O15409 715 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 MC4RP32245 332 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 PFKPQ01813 784 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 SMAD4Q13485 552 aaKnown RBP8.68□□□□□ -1.02
PTPN12-213ENST00000519553 DDX46Q7L014 1031 aaKnown RBP8.68□□□□□ -1.02
PTPN12-213ENST00000519553 ZSWIM3Q96MP5 696 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 ELF4Q99607 663 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-213ENST00000519553 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 DLL4Q9NR61 685 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-213ENST00000519553 SPO11Q9Y5K1 396 aa8.68□□□□□ -1.02
PTPN12-213ENST00000519553 RFXAPO00287 272 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 TGM5O43548 720 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 EYA4O95677 639 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 MPIG6BO95866 241 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 SLC9A1P19634 815 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 LSSP48449 732 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 CAP1Q01518 475 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 STRN3Q13033 797 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 SKIDA1Q1XH10 827 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 ZNF385BQ569K4 471 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 SAPCD2Q86UD0 394 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 EFHBQ8N7U6 833 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 GPR101Q96P66 508 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-213ENST00000519553 PCIF1Q9H4Z3 704 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
PTPN12-213ENST00000519553 NEMP1O14524 444 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 FKBP9O95302 570 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 ENO2P09104 434 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-213ENST00000519553 PTX3P26022 381 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-213ENST00000519553 CNGA1P29973 690 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 FNTBP49356 437 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 IL2P60568 153 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 ZNF174Q15697 407 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 CT47A1Q5JQC4 288 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-213ENST00000519553 PRR31Q5SQ13 230 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 PHF19Q5T6S3 580 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 ESRP1Q6NXG1 681 aaKnown RBP8.66□□□□□ -1.02
PTPN12-213ENST00000519553 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 RTN4RL1Q86UN2 441 aaPredicted RBP8.66□□□□□ -1.02
PTPN12-213ENST00000519553 IGDCC4Q8TDY8 1250 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 ACSS2Q9NR19 701 aa8.66□□□□□ -1.02
PTPN12-213ENST00000519553 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 FFAR3O14843 346 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 PTGS1P23219 599 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms