RNA–Protein interactions for RNA: ENST00000519273.6

ARFGAP1-210, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,176 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-210ENST00000519273 GOLGA8KD6RF30 607 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 KCNK3O14649 394 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 OPA1O60313 960 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 PPP1R18Q6NYC8 613 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 CATSPER3Q86XQ3 398 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 SPAG5Q96R06 1193 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 SH3GL2Q99962 352 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 MYBP10242 640 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 SEPT2Q15019 361 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 MEI1Q5TIA1 1274 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 CDC42EP5Q6NZY7 148 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 ZNF571Q7Z3V5 609 aaPredicted RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 SFR1Q86XK3 245 aa17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 DHX36Q9H2U1 1008 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 LUC7LQ9NQ29 371 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-210ENST00000519273 BBOX1O75936 387 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 SLC12A3P55017 1021 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 SFI1A8K8P3 1242 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CLIC2O15247 247 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 RAD51CO43502 376 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 GJB7Q6PEY0 223 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CERKQ8TCT0 537 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 TSKSQ9UJT2 592 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 ZEB2O60315 1214 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 GNA14O95837 355 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CORO7P57737 925 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 NNTQ13423 1086 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CDC37Q16543 378 aaPredicted RBP17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 HYIQ5T013 277 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CFAP58Q5T655 872 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 CAVIN3Q969G5 261 aa17.69■□□□□ 0.42
ARFGAP1-210ENST00000519273 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 KCNA1Q09470 495 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 IKQ13123 557 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 REEP2Q9BRK0 252 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 AP1M1Q9BXS5 423 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 KCNMB3Q9NPA1 279 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 GDF3Q9NR23 364 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 CASP4P49662 377 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 SLC20A2Q08357 652 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 AIPL1Q9NZN9 384 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 AJAP1Q9UKB5 411 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 PCDHGC5Q9Y5F6 944 aa17.68■□□□□ 0.42
ARFGAP1-210ENST00000519273 ZNF233A6NK53 670 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 HOXD13P35453 343 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 MAGEA9P43362 315 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 DDR1Q08345 913 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 GIT2Q14161 759 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 TAF4BQ92750 862 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 ZC3H12CQ9C0D7 883 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 DNAJC18Q9H819 358 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 EIF3HO15372 352 aaKnown RBP eCLIP17.67■□□□□ 0.422e-12■■■■□ 21
ARFGAP1-210ENST00000519273 CEP104O60308 925 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 HLA-DOAP06340 250 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 UCHL3P15374 230 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 PAK2Q13177 524 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.425e-7■□□□□ 8
ARFGAP1-210ENST00000519273 IRF2BP2Q7Z5L9 587 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 PACS2Q86VP3 889 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 DDX42Q86XP3 938 aaKnown RBP eCLIP17.67■□□□□ 0.426e-7■■□□□ 13
ARFGAP1-210ENST00000519273 CYP2W1Q8TAV3 490 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 RBM46Q8TBY0 533 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 SWAP70Q9UH65 585 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 MEIS2O14770 477 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 PPEF1O14829 653 aaPredicted RBP17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 AKAP3O75969 853 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 RPS6KA1Q15418 735 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 USP21Q9UK80 565 aa17.67■□□□□ 0.42
ARFGAP1-210ENST00000519273 TMCO5BA8MYB1 307 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 HOXA13P31271 388 aaPredicted RBP17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 MARSP56192 900 aaKnown RBP17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 EXOC3L4Q17RC7 722 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 SLFN13Q68D06 897 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 RUBCNQ92622 972 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 PCDHB13Q9Y5F0 798 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 NHSQ6T4R5 1651 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 G3V3G9 751 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 PON1P27169 355 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
ARFGAP1-210ENST00000519273 DNM3Q9UQ16 869 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms