RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 PPP2R5BQ15173 497 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
PVT1-206ENST00000517838 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 NFXL1Q6ZNB6 911 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 HFE2Q6ZVN8 426 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 LRRC8DQ7L1W4 858 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 FERMT3Q86UX7 667 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 GPT2Q8TD30 523 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 SCFD2Q8WU76 684 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 AFG1LQ8WV93 481 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 LLPHQ9BRT6 129 aaKnown RBP8.49□□□□□ -1.05
PVT1-206ENST00000517838 FAM217BQ9NTX9 383 aaPredicted RBP8.49□□□□□ -1.05
PVT1-206ENST00000517838 STX8Q9UNK0 236 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 GBF1Q92538 1859 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 SYCE3A1L190 88 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 TRIM66O15016 1216 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 DHX16O60231 1041 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 FGAP02671 866 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 NOVP48745 357 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 NASPP49321 788 aaPredicted RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 ZNF445P59923 1031 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 UBE2HP62256 183 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 RPS6P62753 249 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 DNM1Q05193 864 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 PDE4BQ07343 736 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 PPARAQ07869 468 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 PDE4DQ08499 809 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 IKBKEQ14164 716 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 MBTPS1Q14703 1052 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 COL19A1Q14993 1142 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 CCDC183Q5T5S1 534 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 CCDC62Q6P9F0 684 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 CPLX2Q6PUV4 134 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 BTNL9Q6UXG8 535 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
PVT1-206ENST00000517838 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 WNT8BQ93098 351 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 MRPL38Q96DV4 380 aaKnown RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 TRIM44Q96DX7 344 aaPredicted RBP8.48□□□□□ -1.05
PVT1-206ENST00000517838 TSPY26PQ9H489 355 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.48□□□□□ -1.05
PVT1-206ENST00000517838 INSL6Q9Y581 213 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 USP34Q70CQ2 3546 aa8.48□□□□□ -1.05
PVT1-206ENST00000517838 BAZ2AQ9UIF9 1905 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 EFCAB14O75071 495 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 SLC3A2P08195 630 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 MMP3P08254 477 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
PVT1-206ENST00000517838 IRS1P35568 1242 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 HTRA4P83105 476 aaPredicted RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 ZNF200P98182 395 aaPredicted RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 SCRN1Q12765 414 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 COL9A3Q14050 684 aaPredicted RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 LY6KQ17RY6 165 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 CCDC96Q2M329 555 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 TRIM71Q2Q1W2 868 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 EPC2Q52LR7 807 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 TCEAL5Q5H9L2 206 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 ZNF618Q5T7W0 954 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 SYDE2Q5VT97 1194 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 RNF207Q6ZRF8 634 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 RAB11FIP4Q86YS3 637 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 ADHFE1Q8IWW8 467 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 BANK1Q8NDB2 785 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 DCAF4Q8WV16 495 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 PABPC5Q96DU9 382 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 PANK2Q9BZ23 570 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
PVT1-206ENST00000517838 HDAC6Q9UBN7 1215 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 GTF2IRD1Q9UHL9 959 aa8.47□□□□□ -1.05
PVT1-206ENST00000517838 MCM3APO60318 1980 aa8.46□□□□□ -1.05
PVT1-206ENST00000517838 ERICH2A1L162 156 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 TSPY2A6NKD2 308 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 H3BNC9 293 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 FOXP2O15409 715 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 LGR5O75473 907 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 CDKL5O76039 1030 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 LTBRP36941 435 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 EXOSC10Q01780 885 aaKnown RBP8.46□□□□□ -1.06
PVT1-206ENST00000517838 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 ARHGAP1Q07960 439 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 FUT2Q10981 343 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 PTK7Q13308 1070 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 GNL2Q13823 731 aaKnown RBP8.46□□□□□ -1.06
PVT1-206ENST00000517838 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
PVT1-206ENST00000517838 PTPROQ16827 1216 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 TBC1D10CQ8IV04 446 aa8.46□□□□□ -1.06
PVT1-206ENST00000517838 MB21D2Q8IYB1 491 aaPredicted RBP8.46□□□□□ -1.06
PVT1-206ENST00000517838 NSUN7Q8NE18 718 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms