RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 DEF6Q9H4E7 631 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MRPL44Q9H9J2 332 aaKnown RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 LZTFL1Q9NQ48 299 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MAP3K20Q9NYL2 800 aaKnown RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 VAV3Q9UKW4 847 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CAPN11Q9UMQ6 739 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 UBE4BO95155 1302 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 OPLAHO14841 1288 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 GCNT3O95395 438 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 VCAM1P19320 739 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 SLC12A3P55017 1021 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 SPA17Q15506 151 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 ECM1Q16610 540 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 NIPA1Q7RTP0 329 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 SFR1Q86XK3 245 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
SPIDR-204ENST00000517824 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 ERGIC2Q96RQ1 377 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
SPIDR-204ENST00000517824 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 PPP1R9AQ9ULJ8 1098 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 SAMM50Q9Y512 469 aa11.89□□□□□ -0.51
SPIDR-204ENST00000517824 RLFQ13129 1914 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 IGLV3-22A0A075B6J6 115 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 NPHP3-ACAD11A0A0J9YXS1 232 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 PHF20L1A8MW92 1017 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 IPO5O00410 1097 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 CTIFO43310 598 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 FECHP22830 423 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 INPP5BP32019 993 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 HSD17B4P51659 736 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 CTTNQ14247 550 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 MTF1Q14872 753 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 ANGEL2Q5VTE6 544 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 DLK2Q6UY11 383 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 RAD9BQ6WBX8 426 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 DYDC2Q96IM9 177 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 RIT2Q99578 217 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 WDR18Q9BV38 432 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 TSGA10Q9BZW7 698 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 NUCKS1Q9H1E3 243 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 RAVER2Q9HCJ3 691 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 ARGLU1Q9NWB6 273 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 KCND2Q9NZV8 630 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 MYO1AQ9UBC5 1043 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 SCAF8Q9UPN6 1271 aaKnown RBP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPIDR-204ENST00000517824 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
SPIDR-204ENST00000517824 FRMPD4Q14CM0 1322 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 MYH10P35580 1976 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-204ENST00000517824 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 NR2F2P24468 414 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 EHHADHQ08426 723 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 TUBB2AQ13885 445 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 EPHA7Q15375 998 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-204ENST00000517824 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 PCNX4Q63HM2 1172 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 ACRBPQ8NEB7 543 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 HHIPL1Q96JK4 782 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
SPIDR-204ENST00000517824 TUBB2BQ9BVA1 445 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
SPIDR-204ENST00000517824 SLC38A10Q9HBR0 1119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms