RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SGSM1Q2NKQ1 1148 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZNF792Q3KQV3 632 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 PLEKHO1Q53GL0 409 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 EAPPQ56P03 285 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 CMPK2Q5EBM0 449 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 RPS26P11Q5JNZ5 115 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 WDR93Q6P2C0 686 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 BZW1Q7L1Q6 419 aaKnown RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SRGAP1Q7Z6B7 1085 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC13Q8IYE1 715 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 ARFGAP2Q8N6H7 521 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 MORC4Q8TE76 937 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SREK1Q8WXA9 508 aaKnown RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 ACSBG1Q96GR2 724 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 FANCD2OSQ96PS1 177 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC28BQ9BUN5 200 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 CARD11Q9BXL7 1154 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 OSBPL7Q9BZF2 842 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SCAND2PQ9GZW5 306 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 CBX8Q9HC52 389 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SATB2Q9UPW6 733 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SPG7Q9UQ90 795 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SSX2IPQ9Y2D8 614 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZNF510Q9Y2H8 683 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 FAM135AQ9P2D6 1515 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 SNAPC4Q5SXM2 1469 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 RALGAPBQ86X10 1494 aa5.32□□□□□ -1.56
HMGB1P19-201ENST00000517578 PIK3C2GO75747 1445 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMEM221A6NGB7 291 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 UNCXA6NJT0 531 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMEM110-MUSTN1A8MSY1 372 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 E7ENQ6 273 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 WDR46O15213 610 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTI1O43156 1089 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TRIM37O94972 964 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 FAM87AP0C7U9 286 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 GHRP10912 638 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 GNAT1P11488 350 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 XRCC5P13010 732 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 PDCP20941 246 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 S100A1P23297 94 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 EIF4BP23588 611 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCND1P24385 295 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CHMP4BP1P59074 171 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TUBA1BP68363 451 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 PHEXP78562 749 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 MXRA7P84157 204 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCZ1BP86790 482 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCZ1P86791 482 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 BNIP3Q12983 259 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 BYSLQ13895 437 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 PLCL1Q15111 1095 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC153Q494R4 210 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZFYVE27Q5T4F4 411 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CYB5D1Q6P9G0 228 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TPTE2Q6XPS3 522 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 RBM43Q6ZSC3 357 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CEP128Q6ZU80 1094 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TUBA1AQ71U36 451 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMEM110Q86TL2 294 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 KIAA0825Q8IV33 1275 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 ITPRIPQ8IWB1 547 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CEP57L1Q8IYX8 460 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 PLD6Q8N2A8 252 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 PPP1R14CQ8TAE6 165 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 MAIP1Q8WWC4 291 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 IRGQQ8WZA9 623 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 ATP6V0A1Q93050 837 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 LRRC45Q96CN5 670 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 SIL1Q9H173 461 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TAOK3Q9H2K8 898 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 METTL14Q9HCE5 456 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 SLC40A1Q9NP59 571 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 RNF19AQ9NV58 838 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMEM39AQ9NV64 488 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 TRMT1Q9NXH9 659 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 LARSQ9P2J5 1176 aaKnown RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 RABL2BQ9UNT1 228 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 C15orf41Q9Y2V0 281 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 IKBKGQ9Y6K9 419 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 ABCA10Q8WWZ4 1543 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 BCORL1Q5H9F3 1711 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CARMIL2Q6F5E8 1435 aa5.31□□□□□ -1.56
HMGB1P19-201ENST00000517578 CFAP74Q9C0B2 1584 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CDHR2Q9BYE9 1310 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 ARHGEF12Q9NZN5 1544 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 M0R2C6 588 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 LSM1O15116 133 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 P4HA2O15460 535 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 SH3BP5O60239 455 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 MGEA5O60502 916 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 PFDN1O60925 122 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 FBXO24O75426 580 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 GSTA1P08263 222 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms