RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 OFD1O75665 1012 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 SARSP49591 514 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 PPATQ06203 517 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 SYCP1Q15431 976 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 TDRD12Q587J7 1177 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 NAV1Q8NEY1 1877 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 ENOX1Q8TC92 643 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 RBPJLQ9UBG7 517 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 KDM3AQ9Y4C1 1321 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 IGLV3-22A0A075B6J6 115 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 TXNP10599 105 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 RPA1P27694 616 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 YWHABP31946 246 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 KRT9P35527 623 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 QARSP47897 775 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 COPB1P53618 953 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 RBL2Q08999 1139 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 TMEM62Q0P6H9 643 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 MTF1Q14872 753 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 DHX37Q8IY37 1157 aaKnown RBP10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 NACC1Q96RE7 527 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 ZIC5Q96T25 663 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 TFR2Q9UP52 801 aa10.79□□□□□ -0.68
EFCAB13-203ENST00000517484 POLR2AP24928 1970 aaKnown RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 EXOC3O60645 756 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 HIP1RO75146 1068 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 RAPGEF1Q13905 1077 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 FASTKD5Q7L8L6 764 aaKnown RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 PDLIM2Q96JY6 352 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 DRC1Q96MC2 740 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 SEMA6BQ9H3T3 888 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 DEF6Q9H4E7 631 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 STK17AQ9UEE5 414 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 CCNE2O96020 404 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 GJB1P08034 283 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 POLGP54098 1239 aaPredicted RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 LMBRD2Q68DH5 695 aaPredicted RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 RINT1Q6NUQ1 792 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 LRRC8AQ8IWT6 810 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 TSKSQ9UJT2 592 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 KLRC4O43908 158 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 SP2Q02086 613 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 CYP4F22Q6NT55 531 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 BRI3BPQ8WY22 251 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 AGO4Q9HCK5 861 aaKnown RBP10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 ANKFY1Q9P2R3 1169 aa10.78□□□□□ -0.68
EFCAB13-203ENST00000517484 PSMD10O75832 226 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 DLATP10515 647 aaKnown RBP10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 CASP4P49662 377 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 ACTR2P61160 394 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 TCP11X2Q5H9J9 407 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 SPECC1LQ69YQ0 1117 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 LBX2Q6XYB7 198 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 SAAL1Q96ER3 474 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 SPATA33Q96N06 139 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 JADE2Q9NQC1 790 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 SLC9A2Q9UBY0 812 aa10.77□□□□□ -0.68
EFCAB13-203ENST00000517484 MKI67P46013 3256 aaKnown RBP10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 WDR64B1ANS9 1081 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 IKBKBO14920 756 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 P4HBP07237 508 aaKnown RBP10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 CCNE1P24864 410 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ERCC5P28715 1186 aaPredicted RBP10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 CYP2C19P33261 490 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ARMCX5Q6P1M9 558 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 VSIG10LQ86VR7 867 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 DNAAF5Q86Y56 855 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 NLRP4Q96MN2 994 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 PARVGQ9HBI0 331 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 PCDHA10Q9Y5I2 948 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 TRIM49P0CI25 452 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 TRIM49CP0CI26 452 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 TNNT1P13805 278 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ADORA2AP29274 412 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ERVK-9P63128 1117 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 ERVK-24P63145 666 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 GIT2Q14161 759 aa10.77□□□□□ -0.69
EFCAB13-203ENST00000517484 CCDC60Q8IWA6 550 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms