RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 MPHOSPH9Q99550 1183 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 LRFN3Q9BTN0 628 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 AGO3Q9H9G7 860 aaKnown RBP1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 GPRC5CQ9NQ84 441 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 FZD1Q9UP38 647 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 SH3BP1Q9Y3L3 701 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 INSL6Q9Y581 213 aa1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 TIMM13Q9Y5L4 95 aaPredicted RBP1.76□□□□□ -2.13
SCARNA23-201ENST00000516060 XDHP47989 1333 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ESYT3A0FGR9 886 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 CCKBRP32239 447 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 BCL6P41182 706 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ETV4P43268 484 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 MAN2A2P49641 1150 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ELLP55199 621 aaPredicted RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 PFKPQ01813 784 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 TAP1Q03518 808 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 GRB10Q13322 594 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 KCNV1Q6PIU1 500 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 USP30Q70CQ3 517 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 SYNE4Q8N205 404 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ANKRD35Q8N283 1001 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ARHGEF39Q8N4T4 335 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 TAB3Q8N5C8 712 aaPredicted RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 BOLLQ8N9W6 283 aaKnown RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 TTLL11Q8NHH1 800 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 MICAL1Q8TDZ2 1067 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 FRS2Q8WU20 508 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 RNF34Q969K3 372 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 DUSP9Q99956 384 aaKnown RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 TACO1Q9BSH4 297 aaKnown RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 SPATA5L1Q9BVQ7 753 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 MYOTQ9UBF9 498 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 CGGBP1Q9UFW8 167 aaPredicted RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 TRPS1Q9UHF7 1281 aa1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF214Q9UL59 606 aaPredicted RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 COA3Q9Y2R0 106 aaPredicted RBP1.75□□□□□ -2.13
SCARNA23-201ENST00000516060 RBMXL2O75526 392 aaKnown RBP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 ENO2P09104 434 aaPredicted RBP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 TYRP1P17643 537 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF165P49910 485 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 ZYXQ15942 572 aaKnown RBP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 KRTAP27-1Q3LI81 207 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 SEZ6Q53EL9 994 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 RABL3Q5HYI8 236 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF425Q6IV72 752 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 Q6YL49 198 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 LRRC55Q6ZSA7 311 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 LARP4Q71RC2 724 aaKnown RBP eCLIP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 PHOSPHO1Q8TCT1 267 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 CLEC4DQ8WXI8 215 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 ZBTB9Q96C00 473 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 MIEF2Q96C03 454 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 TMEM169Q96HH4 297 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 HAUS7Q99871 368 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 KIAA1683Q9H0B3 1180 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 KLHL25Q9H0H3 589 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 SMOC1Q9H4F8 434 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 CYP4F11Q9HBI6 524 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 FBXL7Q9UJT9 491 aa1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 SUPT16HQ9Y5B9 1047 aaKnown RBP1.74□□□□□ -2.13
SCARNA23-201ENST00000516060 PMS2P1A4D2B8 440 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF839A8K0R7 811 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 ARNTLO00327 626 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 SLC26A4O43511 780 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 MCM4P33991 863 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 EIF4A3P38919 411 aaKnown RBP1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 NHLH1Q02575 133 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 HGFACQ04756 655 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 GRIN1Q05586 938 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 CD276Q5ZPR3 534 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 RUSC1-AS1Q66K80 236 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 UNC5AQ6ZN44 842 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 SIMC1Q8NDZ2 872 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 SHCBP1Q8NEM2 672 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 RCC1LQ96I51 464 aaKnown RBP1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 ZDHHC5Q9C0B5 715 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 KBTBD4Q9NVX7 518 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 UBP1Q9NZI7 540 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF580Q9UK33 172 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 TIMELESSQ9UNS1 1208 aa1.73□□□□□ -2.13
SCARNA23-201ENST00000516060 PPM1BO75688 479 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 FAHP16930 419 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 ZFP36P26651 326 aaKnown RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 ZEB1P37275 1124 aaPredicted RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 GTF2A2P52657 109 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 IQCEQ6IPM2 695 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 ADAT2Q7Z6V5 191 aaKnown RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 CCDC103Q8IW40 242 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 TRIM48Q8IWZ4 208 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 NPLOC4Q8TAT6 608 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 ZNF296Q8WUU4 475 aaPredicted RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 C16orf92Q96LL3 132 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 FGD4Q96M96 766 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 PPP1R10Q96QC0 940 aaKnown RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 GPR87Q9BY21 358 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 GBP3Q9H0R5 595 aa1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 ALG13Q9NP73 1137 aaKnown RBP1.72□□□□□ -2.13
SCARNA23-201ENST00000516060 LRP12Q9Y561 859 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms