RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SMAP1Q8IYB5 467 aaPredicted RBP21.95■■□□□ 1.1
LMNA-225ENST00000515824 RIT2Q99578 217 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 IGKV6D-21A0A0A0MT36 114 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 MMP1P03956 469 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 KRT40Q6A162 431 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 LMBR1Q8WVP7 490 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 HERVK_113Q902F9 699 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 SLC5A5Q92911 643 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 MBOAT7Q96N66 472 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 NAP1L4Q99733 375 aaKnown RBP21.94■■□□□ 1.1
LMNA-225ENST00000515824 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 DDX25Q9UHL0 483 aaKnown RBP21.94■■□□□ 1.1
LMNA-225ENST00000515824 TRPC6Q9Y210 931 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 SAMM50Q9Y512 469 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 PCDHA10Q9Y5I2 948 aa21.94■■□□□ 1.1
LMNA-225ENST00000515824 RRN3P2A6NIE6 340 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 GAS7O60861 476 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 PSAPP07602 524 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 ACTN1P12814 892 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 THPOP40225 353 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 MCM2P49736 904 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 FOSBP53539 338 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 ADAM17P78536 824 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 NR5A1Q13285 461 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 SAFBQ15424 915 aaKnown RBP eCLIP21.93■■□□□ 1.1
LMNA-225ENST00000515824 GRIK4Q16099 956 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 TRIM71Q2Q1W2 868 aaKnown RBP21.93■■□□□ 1.1
LMNA-225ENST00000515824 LRCH2Q5VUJ6 765 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 PPP4R3AQ6IN85 833 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 SWSAP1Q6NVH7 229 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 OTOP2Q7RTS6 562 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 FAM184AQ8NB25 1140 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 TEKT3Q9BXF9 490 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 FTOQ9C0B1 505 aaKnown RBP eCLIP21.93■■□□□ 1.1
LMNA-225ENST00000515824 ZNF302Q9NR11 478 aa21.93■■□□□ 1.1
LMNA-225ENST00000515824 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.92■■□□□ 1.1
LMNA-225ENST00000515824 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.92■■□□□ 1.1
LMNA-225ENST00000515824 INSRRP14616 1297 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 GCFC2P16383 781 aaKnown RBP21.92■■□□□ 1.1
LMNA-225ENST00000515824 SMAD3P84022 425 aaKnown RBP21.92■■□□□ 1.1
LMNA-225ENST00000515824 PLCB4Q15147 1175 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 ZNF618Q5T7W0 954 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 RASIP1Q5U651 963 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 PDXDC2PQ6P474 469 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 DIS3L2Q8IYB7 885 aaKnown RBP21.92■■□□□ 1.1
LMNA-225ENST00000515824 WNT8BQ93098 351 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 C8orf76Q96K31 380 aa21.92■■□□□ 1.1
LMNA-225ENST00000515824 POTEB3A0JP26 581 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 WDR64B1ANS9 1081 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 RSPH10B2B2RC85 870 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 BTBD18B2RXH4 712 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 CCNT1O60563 726 aaKnown RBP21.91■■□□□ 1.1
LMNA-225ENST00000515824 CAND2O75155 1236 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 RSPH10BP0C881 870 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 IGBP1P78318 339 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 TAF2Q6P1X5 1199 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 POTEBQ6S5H4 581 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 CCDC60Q8IWA6 550 aaPredicted RBP21.91■■□□□ 1.1
LMNA-225ENST00000515824 VWCEQ96DN2 955 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 TUBE1Q9UJT0 475 aa21.91■■□□□ 1.1
LMNA-225ENST00000515824 HBP1O60381 514 aa21.9■■□□□ 1.1
LMNA-225ENST00000515824 SFNP31947 248 aa21.9■■□□□ 1.1
LMNA-225ENST00000515824 EARS2Q5JPH6 523 aaKnown RBP21.9■■□□□ 1.1
LMNA-225ENST00000515824 CKAP2LQ8IYA6 745 aa21.9■■□□□ 1.1
LMNA-225ENST00000515824 TNFRSF25Q93038 417 aa21.9■■□□□ 1.1
LMNA-225ENST00000515824 DISC1Q9NRI5 854 aa21.9■■□□□ 1.1
LMNA-225ENST00000515824 MAFBQ9Y5Q3 323 aaPredicted RBP21.9■■□□□ 1.1
LMNA-225ENST00000515824 SZT2Q5T011 3432 aa21.89■■□□□ 1.1
LMNA-225ENST00000515824 ZBBXA8MT70 800 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 PSMD10O75832 226 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 JAK3P52333 1124 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 GUCY1B3Q02153 619 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 RSPH3Q86UC2 560 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 ETNPPLQ8TBG4 499 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 ATP8B4Q8TF62 1192 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 GJA10Q969M2 543 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 TMX3Q96JJ7 454 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 FAM20AQ96MK3 541 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 CXXC1Q9P0U4 656 aaPredicted RBP21.89■■□□□ 1.09
LMNA-225ENST00000515824 GABBR1Q9UBS5 961 aa21.89■■□□□ 1.09
LMNA-225ENST00000515824 TRIP12Q14669 1992 aaPredicted RBP21.88■■□□□ 1.09
LMNA-225ENST00000515824 MBLAC1A4D2B0 266 aaPredicted RBP21.88■■□□□ 1.09
LMNA-225ENST00000515824 CHMP2AO43633 222 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 SLC37A4O43826 429 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 MARCH6O60337 910 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 SLC34A2O95436 690 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 CXCL10P02778 98 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 RPLP2P05387 115 aaKnown RBP21.88■■□□□ 1.09
LMNA-225ENST00000515824 GPNMBQ14956 572 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 MARCH8Q5T0T0 291 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 TRAF7Q6Q0C0 670 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 RPAINQ86UA6 219 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 FBXO18Q8NFZ0 1043 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 RDM1Q8NG50 284 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 UNC45AQ9H3U1 944 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 KIF3AQ9Y496 699 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 SLC4A7Q9Y6M7 1214 aa21.88■■□□□ 1.09
LMNA-225ENST00000515824 FAM205CA6NFA0 338 aa21.87■■□□□ 1.09
LMNA-225ENST00000515824 TBX3O15119 743 aa21.87■■□□□ 1.09
LMNA-225ENST00000515824 NBNO60934 754 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms