RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 TUBB4AP04350 444 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 FCER1AP12319 257 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 GAP43P17677 238 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 TM4SF4P48230 202 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 LRMPQ12912 555 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 COASYQ13057 564 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 PPIL2Q13356 520 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 TRIM14Q14142 442 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 GIT2Q14161 759 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 TMEM132BQ14DG7 1078 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 PGM5Q15124 567 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 FAM26FQ5R3K3 315 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 LDLRAD1Q5T700 205 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 ANKRD40Q6AI12 368 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 PRRT2Q7Z6L0 340 aaPredicted RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 GPBP1Q86WP2 473 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 ZC3H3Q8IXZ2 948 aaKnown RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 ZNF507Q8TCN5 953 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 NSUN6Q8TEA1 469 aaKnown RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 OPTNQ96CV9 577 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 CCDC51Q96ER9 411 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 CDHR1Q96JP9 859 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 RMDN3Q96TC7 470 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 SRRTQ9BXP5 876 aaKnown RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 AGO4Q9HCK5 861 aaKnown RBP11.34□□□□□ -0.59
SNF8-214ENST00000515174 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 ZSWIM8A7E2V4 1837 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 PLXNA1Q9UIW2 1896 aa11.34□□□□□ -0.59
SNF8-214ENST00000515174 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 N4BP3O15049 544 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 STX10O60499 249 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 P4HBP07237 508 aaKnown RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 FECHP22830 423 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 SFNP31947 248 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 COPB2P35606 906 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 DNM2P50570 870 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 BAATQ14032 418 aaPredicted RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 BMT2Q1RMZ1 405 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 ZCWPW2Q504Y3 356 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 C1orf186Q6ZWK4 172 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 RETREG2Q8NC44 543 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 WNK4Q96J92 1243 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 CEP63Q96MT8 703 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 NAA15Q9BXJ9 866 aaKnown RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 UNC45AQ9H3U1 944 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 OLFML3Q9NRN5 406 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 DBR1Q9UK59 544 aaKnown RBP11.33□□□□□ -0.6
SNF8-214ENST00000515174 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 MGAMO43451 1857 aa11.33□□□□□ -0.6
SNF8-214ENST00000515174 LGALS16A8MUM7 142 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 TEX33O43247 280 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 CCP110O43303 1012 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 GNA14O95837 355 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 NR3C2P08235 984 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 IDEP14735 1019 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 CCND2P30279 289 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 ZNF131P52739 623 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 MARSP56192 900 aaKnown RBP11.32□□□□□ -0.6
SNF8-214ENST00000515174 PSMC6P62333 389 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 FKBP3Q00688 224 aaKnown RBP11.32□□□□□ -0.6
SNF8-214ENST00000515174 KRT76Q01546 638 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.63e-11■□□□□ 10.8
SNF8-214ENST00000515174 MTMR1Q13613 665 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 ARID5BQ14865 1188 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 NFIL3Q16649 462 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 EDRF1Q3B7T1 1238 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
SNF8-214ENST00000515174 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 GADL1Q6ZQY3 521 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
SNF8-214ENST00000515174 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
SNF8-214ENST00000515174 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 TC2NQ8N9U0 490 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms