RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	JAM2	P57087	298 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	CCDC144B	Q3MJ40	725 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	DPP8	Q6V1X1	898 aa	Predicted RBP	6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	BRAP	Q7Z569	592 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	OSTM1	Q86WC4	334 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	PTRH1	Q86Y79	214 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	SCLY	Q96I15	445 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	BARX1	Q9HBU1	254 aa	Predicted RBP	6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	RIC8B	Q9NVN3	520 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	TMEM260	Q9NX78	707 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	ZFP69B	Q9UJL9	534 aa		6.28	□□□□□ -1.4
MATR3-223	ENST00000514402	TCRBV16S1A1N1	A0A5B0	115 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	FAM90A27P	A6NNH2	459 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	RASGRP1	O95267	797 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	KNG1	P01042	644 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	DNM2	P50570	870 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	REXO1L1P	Q8IX06	675 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	MBD6	Q96DN6	1003 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	KRTAP4-11	Q9BYQ6	195 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	RBPJL	Q9UBG7	517 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	DUSP10	Q9Y6W6	482 aa		6.27	□□□□□ -1.41
MATR3-223	ENST00000514402	RFPL3	O75679	317 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	KLHL18	O94889	574 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	PLAT	P00750	562 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	C4BPA	P04003	597 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	KRT15	P19012	456 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	AOAH	P28039	575 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	NFATC3	Q12968	1075 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	SQSTM1	Q13501	440 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	OVCH1	Q7RTY7	1134 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	NOSTRIN	Q8IVI9	506 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	SH3TC2	Q8TF17	1288 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	DDX1	Q92499	740 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	BDH2	Q9BUT1	245 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	ARHGAP28	Q9P2N2	729 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402	ADAM29	Q9UKF5	820 aa		6.26	□□□□□ -1.41
MATR3-223	ENST00000514402		H0Y858	1186 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	CUTA	O60888	179 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	ASL	P04424	464 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	KCNA6	P17658	529 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	IGFALS	P35858	605 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	PLP2	Q04941	152 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	ARHGAP44	Q17R89	818 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	CXXC5	Q7LFL8	322 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	DDX53	Q86TM3	631 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	FERMT3	Q86UX7	667 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	AJUBA	Q96IF1	538 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	KCNH7	Q9NS40	1196 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	INVS	Q9Y283	1065 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	COQ6	Q9Y2Z9	468 aa		6.25	□□□□□ -1.41
MATR3-223	ENST00000514402	SLC12A8	A0AV02	714 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402		K7ESM1	405 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	B4GALT3	O60512	393 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	ITGB3	P05106	788 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	PTGS1	P23219	599 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	SDHA	P31040	664 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	EFEMP1	Q12805	493 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	SPATS1	Q496A3	300 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	TMEM177	Q53S58	311 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402		Q6ZUG5	572 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	OTOP1	Q7RTM1	612 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	FGD2	Q7Z6J4	655 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	CISD2	Q8N5K1	135 aa	Known RBP	6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	STPG3	Q8N7X2	389 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	KATNBL1	Q9H079	304 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	FBXO10	Q9UK96	956 aa		6.24	□□□□□ -1.41
MATR3-223	ENST00000514402	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	PRAMEF25	A6NGN4	478 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	LAMTOR5	O43504	91 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	HIP1R	O75146	1068 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	IL18BP	O95998	194 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	GLRB	P48167	497 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	TTC9B	Q8N6N2	239 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	C2orf69	Q8N8R5	385 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	NUDT10	Q8NFP7	164 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	DLG3	Q92796	817 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	NUDT11	Q96G61	164 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	SLC39A2	Q9NP94	309 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	INCENP	Q9NQS7	918 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	INTS7	Q9NVH2	962 aa	Known RBP	6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	GALNT8	Q9NY28	637 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	BTBD7	Q9P203	1132 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	ASB1	Q9Y576	335 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	B3GALT1	Q9Y5Z6	326 aa		6.23	□□□□□ -1.41
MATR3-223	ENST00000514402	RAPGEF3	O95398	923 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	POLD1	P28340	1107 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	FLT3	P36888	993 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	EPHB4	P54760	987 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	STIL	Q15468	1287 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	TCEA2	Q15560	299 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	RALYL	Q86SE5	291 aa	Known RBP	6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	HOMER1	Q86YM7	354 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	KBTBD2	Q8IY47	623 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	IGSF22	Q8N9C0	903 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	CLUHP3	Q96NS8	147 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	TACO1	Q9BSH4	297 aa	Known RBP	6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms