RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 MSL3Q8N5Y2 521 aaKnown RBP17.81■□□□□ 0.44
NUP54-214ENST00000514307 LRRC15Q8TF66 581 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 ATP6V0A1Q93050 837 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 BHMT2Q9H2M3 363 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 ANKEF1Q9NU02 776 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 CPA4Q9UI42 421 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 GAP43P17677 238 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 CYP11B2P19099 503 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 CDK11BP21127 795 aaKnown RBP17.8■□□□□ 0.44
NUP54-214ENST00000514307 DEFB115Q30KQ5 88 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 CCDC43Q96MW1 224 aaKnown RBP17.8■□□□□ 0.44
NUP54-214ENST00000514307 LXNQ9BS40 222 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 MLXIPQ9HAP2 919 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 COL4A3BPQ9Y5P4 624 aa17.8■□□□□ 0.44
NUP54-214ENST00000514307 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 BICDL2A1A5D9 508 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 ACTR2P61160 394 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 TTLL4Q14679 1199 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 HERC4Q5GLZ8 1057 aaPredicted RBP17.79■□□□□ 0.44
NUP54-214ENST00000514307 C17orf99Q6UX52 265 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 ADSSL1Q8N142 457 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 BANK1Q8NDB2 785 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 PIGOQ8TEQ8 1089 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 SCFD2Q8WU76 684 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 DNAJC19Q96DA6 116 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 TIPINQ9BVW5 301 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
NUP54-214ENST00000514307 PTPRFP10586 1907 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 CA12O43570 354 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 COBLO75128 1261 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 TBCAO75347 108 aaKnown RBP17.78■□□□□ 0.44
NUP54-214ENST00000514307 ATG7O95352 703 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 ADCY5O95622 1261 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 CCNE2O96020 404 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 PRCPP42785 496 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 PAK1Q13153 545 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 GIT2Q14161 759 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 GRB14Q14449 540 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 ARSHQ5FYA8 562 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 SWSAP1Q6NVH7 229 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 SARM1Q6SZW1 724 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
NUP54-214ENST00000514307 SEPT1Q8WYJ6 367 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 R3HDMLQ9H3Y0 253 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 NRBP2Q9NSY0 501 aa17.78■□□□□ 0.44
NUP54-214ENST00000514307 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
NUP54-214ENST00000514307 ASTN1O14525 1302 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 BACH1O14867 736 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 FGFR1OPO95684 399 aaKnown RBP17.77■□□□□ 0.44
NUP54-214ENST00000514307 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.44
NUP54-214ENST00000514307 NCAPHQ15003 741 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 FAM160B1Q5W0V3 765 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 METTL7BQ6UX53 244 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 C1orf186Q6ZWK4 172 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
NUP54-214ENST00000514307 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
NUP54-214ENST00000514307 NELFBQ8WX92 580 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 CREBZFQ9NS37 354 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 SEL1LQ9UBV2 794 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 KCNG1Q9UIX4 513 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 A0A0G2JMZ2 1700 aa17.77■□□□□ 0.44
NUP54-214ENST00000514307 CBFA2T2O43439 604 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 TPM3P06753 285 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 TXNP10599 105 aaKnown RBP17.76■□□□□ 0.43
NUP54-214ENST00000514307 GUCY2CP25092 1073 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 APLP1P51693 650 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 SP2Q02086 613 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 STK4Q13043 487 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 FAM26FQ5R3K3 315 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 PADI6Q6TGC4 694 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 STXBP4Q6ZWJ1 553 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 ARMCX2Q7L311 632 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 EEPD1Q7L9B9 569 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 ANKRD20A12PQ8NF67 263 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 FGD4Q96M96 766 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 SLC39A2Q9NP94 309 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 FANCLQ9NW38 375 aa17.76■□□□□ 0.43
NUP54-214ENST00000514307 ADGRA2Q96PE1 1338 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
NUP54-214ENST00000514307 FAM13AO94988 1023 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 GGPS1O95749 300 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 CD44P16070 742 aaKnown RBP17.75■□□□□ 0.43
NUP54-214ENST00000514307 CCNE1P24864 410 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 COASYQ13057 564 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 MAP2K5Q13163 448 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 GRM1Q13255 1194 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms