RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 EFHBQ8N7U6 833 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 KLHL23Q8NBE8 558 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 SMRP1Q8NCR6 262 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 POF1BQ8WVV4 589 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 P2RX5Q93086 422 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 PPP2R3CQ969Q6 453 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 SENP2Q9HC62 589 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 FAM86C1Q9NVL1 165 aa23.46■■□□□ 1.35
SQSTM1-215ENST00000514093 TTC3P53804 2025 aa23.45■■□□□ 1.35
SQSTM1-215ENST00000514093 HDAC1Q13547 482 aaPredicted RBP23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 GRIK4Q16099 956 aa23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 TSHZ1Q6ZSZ6 1077 aa23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 RPGRIP1Q96KN7 1286 aa23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 TUBE1Q9UJT0 475 aa23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 USP15Q9Y4E8 981 aaPredicted RBP23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 KAT6AQ92794 2004 aa23.45■■□□□ 1.34
SQSTM1-215ENST00000514093 ST18O60284 1047 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 ATP9AO75110 1047 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 PPFIA3O75145 1194 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 GLP2RO95838 553 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 IBSPP21815 317 aaPredicted RBP23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 IGBP1P78318 339 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 COASYQ13057 564 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 MARCH8Q5T0T0 291 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 USP17L6PQ6QN14 398 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 FBXL6Q8N531 539 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 SENP7Q9BQF6 1050 aa23.44■■□□□ 1.34
SQSTM1-215ENST00000514093 GATMP50440 423 aa23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 VCPP55072 806 aaKnown RBP23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 RBM10P98175 930 aaKnown RBP23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 PLEKHM2Q8IWE5 1019 aa23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 CMTR2Q8IYT2 770 aaKnown RBP23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 FAM49AQ9H0Q0 323 aaPredicted RBP23.43■■□□□ 1.34
SQSTM1-215ENST00000514093 GSTTP1A0A1W2PQM5 241 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 PER2O15055 1255 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 MRPS6P82932 125 aaKnown RBP23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 TMEM62Q0P6H9 643 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 CBX2Q14781 532 aaPredicted RBP23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 PKN1Q16512 942 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 PCNX4Q63HM2 1172 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 CRIPAKQ8N1N5 446 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 SMARCC2Q8TAQ2 1214 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 PRRX2Q99811 253 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 IL25Q9H293 177 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 PKD2L1Q9P0L9 805 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 KIAA1671Q9BY89 1806 aa23.42■■□□□ 1.34
SQSTM1-215ENST00000514093 MBLAC1A4D2B0 266 aaPredicted RBP23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 NAALADL2Q58DX5 795 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 NLRX1Q86UT6 975 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 NPAS4Q8IUM7 802 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 MICAL1Q8TDZ2 1067 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 GLG1Q92896 1179 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 PHF7Q9BWX1 381 aaPredicted RBP23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 ERAP1Q9NZ08 941 aa23.41■■□□□ 1.34
SQSTM1-215ENST00000514093 IFIT3O14879 490 aaKnown RBP23.4■■□□□ 1.34
SQSTM1-215ENST00000514093 GFRA3O60609 400 aa23.4■■□□□ 1.34
SQSTM1-215ENST00000514093 SEPT1Q8WYJ6 367 aa23.4■■□□□ 1.34
SQSTM1-215ENST00000514093 TLE6Q9H808 572 aa23.4■■□□□ 1.34
SQSTM1-215ENST00000514093 KCNA2P16389 499 aa23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 SIGLEC14Q08ET2 396 aa23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 TROAPQ12815 778 aa23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 GIMAP8Q8ND71 665 aaPredicted RBP23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 PADI3Q9ULW8 664 aa23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 KMT2EQ8IZD2 1858 aa23.39■■□□□ 1.33
SQSTM1-215ENST00000514093 ZDBF2Q9HCK1 2354 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 HIP1O00291 1037 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 MEIS2O14770 477 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 STAG3L1P0CL83 205 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 INSRRP14616 1297 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 IER5Q5VY09 327 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 ATOH1Q92858 354 aaPredicted RBP23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 CUL5Q93034 780 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 ASIC4Q96FT7 647 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 FTHL17Q9BXU8 183 aa23.38■■□□□ 1.33
SQSTM1-215ENST00000514093 SCG2P13521 617 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 AVPR2P30518 371 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 TRDNQ13061 729 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 XRRA1Q6P2D8 792 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 VN1R2Q8NFZ6 395 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 OSBPL3Q9H4L5 887 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 SMARCAD1Q9H4L7 1026 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 LRFN2Q9ULH4 789 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 TRPV2Q9Y5S1 764 aa23.37■■□□□ 1.33
SQSTM1-215ENST00000514093 CFAP54Q96N23 3096 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 ITGB5P18084 799 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 WTAPQ15007 396 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 TMEM266Q2M3C6 531 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 SPOUT1Q5T280 376 aaKnown RBP23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 CHD1LQ86WJ1 897 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 TRAPPC12Q8WVT3 735 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 GPRASP2Q96D09 838 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 PLXNA4Q9HCM2 1894 aa23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 ZFHX2Q9C0A1 2572 aaPredicted RBP23.36■■□□□ 1.33
SQSTM1-215ENST00000514093 ERICH2A1L162 156 aa23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 PDGFBP01127 241 aaPredicted RBP23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 ERVFC1P60507 584 aa23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 PAK2Q13177 524 aa23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 ATP8B4Q8TF62 1192 aa23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 PCYT2Q99447 389 aa23.35■■□□□ 1.33
SQSTM1-215ENST00000514093 APOL5Q9BWW9 433 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms