RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 MBOAT7Q96N66 472 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 AIFM3Q96NN9 605 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PRO3102Q9H379 93 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 SMARCAD1Q9H4L7 1026 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 TUT1Q9H6E5 874 aaKnown RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PRDM5Q9NQX1 630 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 ERAP1Q9NZ08 941 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 GTF2IRD1Q9UHL9 959 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 TBX3O15119 743 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 B4GALT4O60513 344 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 ATP9AO75110 1047 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 CAND2O75155 1236 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 LGR5O75473 907 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 ATG7O95352 703 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 BRD1O95696 1058 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 PFKMP08237 780 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 ZNF286BP0CG31 522 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 ARP10275 920 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 SFNP31947 248 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 TCF7P36402 384 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-210ENST00000513957 MAGEA10P43363 369 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-210ENST00000513957 PSMC6P62333 389 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 BFSP2Q13515 415 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 KIAA0753Q2KHM9 967 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 PRR16Q569H4 304 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 FAM47CQ5HY64 1035 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 KRT40Q6A162 431 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 MFSD5Q6N075 450 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 PLPPR4Q7Z2D5 763 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 TMEM199Q8N511 208 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 CYP2W1Q8TAV3 490 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 FAM20AQ96MK3 541 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-210ENST00000513957 HIPK3Q9H422 1215 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 AZI2Q9H6S1 392 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 ZMYND8Q9ULU4 1186 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-210ENST00000513957 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 FARP1Q9Y4F1 1045 aaPredicted RBP9.27□□□□□ -0.93
NEDD4-210ENST00000513957 NRCAMQ92823 1304 aa9.27□□□□□ -0.93
NEDD4-210ENST00000513957 IGKV6D-21A0A0A0MT36 114 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 TRIM43BA6NCK2 446 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 RFC2P35250 354 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 JAK3P52333 1124 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 ACTR2P61160 394 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 ITGB3BPQ13352 177 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 PPIGQ13427 754 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 PTGISQ16647 500 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 INF2Q27J81 1249 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 FAM160B1Q5W0V3 765 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 MIS18BP1Q6P0N0 1132 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 PIK3AP1Q6ZUJ8 805 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 DIS3L2Q8IYB7 885 aaKnown RBP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 SLFN12Q8IYM2 578 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 SLC5A5Q92911 643 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 TRIM43Q96BQ3 446 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 DDX25Q9UHL0 483 aaKnown RBP9.26□□□□□ -0.93
NEDD4-210ENST00000513957 ARID2Q68CP9 1835 aa9.26□□□□□ -0.93
NEDD4-210ENST00000513957 COL1A2P08123 1366 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 GSTTP1A0A1W2PQM5 241 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 C17orf102A2RUQ5 167 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 RRN3P2A6NIE6 340 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 ADAMTS3O15072 1205 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 MSH4O15457 936 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 MAP3K13O43283 966 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 GAS7O60861 476 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 PSAPP07602 524 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 SYN1P17600 705 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 SP4Q02446 784 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 FPGSQ05932 587 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 PTK7Q13308 1070 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 CUL4AQ13619 759 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 LETM2Q2VYF4 491 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 LRCH2Q5VUJ6 765 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 TAF2Q6P1X5 1199 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 PSRC1Q6PGN9 363 aaPredicted RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 TDHQ8IZJ6 230 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 ETNPPLQ8TBG4 499 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 GLG1Q92896 1179 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 INTS4Q96HW7 963 aaKnown RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 TEKT3Q9BXF9 490 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 UBE2OQ9C0C9 1292 aaKnown RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 KCNMB3Q9NPA1 279 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 TRMT13Q9NUP7 481 aaKnown RBP9.25□□□□□ -0.93
NEDD4-210ENST00000513957 HDAC6Q9UBN7 1215 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 PCDHA10Q9Y5I2 948 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 SCN5AQ14524 2016 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 IGSF9BQ9UPX0 1349 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 MYH15Q9Y2K3 1946 aa9.25□□□□□ -0.93
NEDD4-210ENST00000513957 SIP14410 1827 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 BTBD18B2RXH4 712 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms