RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TRIM9Q9C026 710 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 UTYO14607 1347 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 PMS2P54278 862 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 KCNQ4P56696 695 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 ANKRD35Q8N283 1001 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 SH3GLB2Q9NR46 395 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 LMTK2Q8IWU2 1503 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 DLC1Q96QB1 1528 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 GRID2IPA4D2P6 1211 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 PDHA1P08559 390 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 MAPK4P31152 587 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 RCAN1P53805 252 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 KCNB1Q14721 858 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 CASC4Q6P4E1 433 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 NSMFQ6X4W1 530 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 PACS2Q86VP3 889 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 SPDL1Q96EA4 605 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 IL17RAQ96F46 866 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 USH1CQ9Y6N9 552 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 CDHR2Q9BYE9 1310 aa8.4□□□□□ -1.07
CLCN3-209ENST00000513761 MAP7D1Q3KQU3 841 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 MIER3Q7Z3K6 550 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 FBXO11Q86XK2 927 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 DGKHQ86XP1 1220 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TXLNGQ9NUQ3 528 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TMEM47Q9BQJ4 181 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 PITPNM3Q9BZ71 974 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 DCP1AQ9NPI6 582 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 CCNL1Q9UK58 526 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 DEPDC5O75140 1603 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 RAD51CO43502 376 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 STRN3Q13033 797 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 PDCD7Q8N8D1 485 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 RAD54LQ92698 747 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 BHMT2Q9H2M3 363 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 MYOM1P52179 1685 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SART1O43290 800 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SIK1P57059 783 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 BFSP1Q12934 665 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 ASPRV1Q53RT3 343 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SLFN13Q68D06 897 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 CYFIP2Q96F07 1278 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 LARSQ9P2J5 1176 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TTI1O43156 1089 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 ZNF18P17022 549 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 PHBP35232 272 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TRPC3Q13507 836 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 PPP2R5DQ14738 602 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 BSPRYQ5W0U4 402 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SRRM1Q8IYB3 904 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 ECT2Q9H8V3 914 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 DNAJC12Q9UKB3 198 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 EXOC1LA0A1B0GW35 172 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TDP2O95551 362 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 ELF1P32519 619 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 NSFP46459 744 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 RASA3Q14644 834 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 GUF1Q8N442 669 aaKnown RBP8.39□□□□□ -1.07
CLCN3-209ENST00000513761 TRIM51Q9BSJ1 452 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
CLCN3-209ENST00000513761 PVALEFA0A1B0GWK0 134 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 POTECB2RU33 542 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 CDK8P49336 464 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SH3RF3Q8TEJ3 882 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SEC16BQ96JE7 1060 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 C1orf112Q9NSG2 853 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 CA4P22748 312 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 MSH2P43246 934 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SNAP25P60880 206 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SFR1Q86XK3 245 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PROM2Q8N271 834 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SAAL1Q96ER3 474 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PCDHA6Q9UN73 950 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PCDHA8Q9Y5H6 950 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SGK1O00141 431 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 TRIM37O94972 964 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 GCFC2P16383 781 aaKnown RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 HSPA6P17066 643 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 FGFR4P22455 802 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms