RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 MARK3P27448 753 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 PRPHP41219 470 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 CEBPZQ03701 1054 aaKnown RBP23.65■■□□□ 1.38
NEIL3-202ENST00000513321 FAM47CQ5HY64 1035 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 PDXDC2PQ6P474 469 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 NFRKBQ6P4R8 1299 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 AFAP1L1Q8TED9 768 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 USP28Q96RU2 1077 aa23.65■■□□□ 1.38
NEIL3-202ENST00000513321 RTP1P59025 263 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 EPHA7Q15375 998 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 IL17AQ16552 155 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 TMEM266Q2M3C6 531 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 TRIM60Q495X7 471 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 DTHD1Q6ZMT9 781 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 C7orf31Q8N865 590 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 ZNF396Q96N95 335 aaPredicted RBP23.64■■□□□ 1.38
NEIL3-202ENST00000513321 SEZ6LQ9BYH1 1024 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 TFIP11Q9UBB9 837 aaKnown RBP23.64■■□□□ 1.38
NEIL3-202ENST00000513321 ATP11BQ9Y2G3 1177 aa23.64■■□□□ 1.38
NEIL3-202ENST00000513321 MAFBQ9Y5Q3 323 aaPredicted RBP23.64■■□□□ 1.38
NEIL3-202ENST00000513321 SLC26A2P50443 739 aa23.64■■□□□ 1.37
NEIL3-202ENST00000513321 FXR2P51116 673 aaKnown RBP eCLIP23.64■■□□□ 1.37
NEIL3-202ENST00000513321 HDAC6Q9UBN7 1215 aa23.64■■□□□ 1.37
NEIL3-202ENST00000513321 MKI67P46013 3256 aaKnown RBP23.63■■□□□ 1.37
NEIL3-202ENST00000513321 SCN10AQ9Y5Y9 1956 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 POTEMA6NI47 508 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 NUCB2P80303 420 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 TLE2Q04725 743 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 PLCB4Q15147 1175 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 PTPAQ15257 358 aa23.63■■□□□ 1.37
NEIL3-202ENST00000513321 ARL6IP4Q66PJ3 421 aaKnown RBP23.63■■□□□ 1.37
NEIL3-202ENST00000513321 PQBP1O60828 265 aaKnown RBP23.62■■□□□ 1.37
NEIL3-202ENST00000513321 SMIM10L2AP0DMW4 78 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 SMIM10L2BP0DMW5 78 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 ATP4AP20648 1035 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 PTPN11Q06124 597 aaPredicted RBP23.62■■□□□ 1.37
NEIL3-202ENST00000513321 PDIA5Q14554 519 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 UGCGQ16739 394 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 ANKRD33Q7Z3H0 272 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 SESTD1Q86VW0 696 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 CKAP2LQ8IYA6 745 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 BANK1Q8NDB2 785 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 RGL1Q9NZL6 768 aa23.62■■□□□ 1.37
NEIL3-202ENST00000513321 MROH7Q68CQ1 1323 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 POTEB3A0JP26 581 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 ZNF862O60290 1169 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 P4HBP07237 508 aaKnown RBP23.61■■□□□ 1.37
NEIL3-202ENST00000513321 POTEBQ6S5H4 581 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 TRMT1LQ7Z2T5 733 aaKnown RBP23.61■■□□□ 1.37
NEIL3-202ENST00000513321 DPF3Q92784 378 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 ATP6V0A1Q93050 837 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 DYDC2Q96IM9 177 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 TOX2Q96NM4 488 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 EIF2AK1Q9BQI3 630 aaKnown RBP23.61■■□□□ 1.37
NEIL3-202ENST00000513321 TRPV6Q9H1D0 765 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 LRWD1Q9UFC0 647 aa23.61■■□□□ 1.37
NEIL3-202ENST00000513321 IGSF9BQ9UPX0 1349 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 DNAH12Q6ZR08 3092 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 DCDC2CA8MYV0 355 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 QARSP47897 775 aaKnown RBP23.6■■□□□ 1.37
NEIL3-202ENST00000513321 NASPP49321 788 aaPredicted RBP23.6■■□□□ 1.37
NEIL3-202ENST00000513321 PSMC5P62195 406 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 SLC39A14Q15043 492 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 FAM126BQ8IXS8 530 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 IGSF22Q8N9C0 903 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 ATP8B4Q8TF62 1192 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 HSD17B14Q9BPX1 270 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 RAB34Q9BZG1 259 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 SETD4Q9NVD3 440 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 GTF2IRD1Q9UHL9 959 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 TRPC6Q9Y210 931 aa23.6■■□□□ 1.37
NEIL3-202ENST00000513321 VWA3AA6NCI4 1184 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 SLITRK3O94933 977 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 CYP4A11Q02928 519 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 DNM1Q05193 864 aaKnown RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 ATL3Q6DD88 541 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 GDF6Q6KF10 455 aaPredicted RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 TNPO1Q92973 898 aaKnown RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 IPO9Q96P70 1041 aaKnown RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 TRMT13Q9NUP7 481 aaKnown RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 EVI5O60447 810 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 B4GALT4O60513 344 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 INSRRP14616 1297 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 MARCKSP29966 332 aaPredicted RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 PPFIA1Q13136 1202 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 CTTNQ14247 550 aaKnown RBP23.59■■□□□ 1.37
NEIL3-202ENST00000513321 HIC1Q14526 733 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 TPH2Q8IWU9 490 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 NRBP2Q9NSY0 501 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 ATP6V1DQ9Y5K8 247 aa23.59■■□□□ 1.37
NEIL3-202ENST00000513321 NRCAMQ92823 1304 aa23.58■■□□□ 1.37
NEIL3-202ENST00000513321 C17orf102A2RUQ5 167 aa23.58■■□□□ 1.36
NEIL3-202ENST00000513321 TLR3O15455 904 aaKnown RBP23.58■■□□□ 1.36
NEIL3-202ENST00000513321 HBP1O60381 514 aa23.58■■□□□ 1.36
NEIL3-202ENST00000513321 DKC1O60832 514 aaKnown RBP eCLIP23.58■■□□□ 1.36
NEIL3-202ENST00000513321 CD4P01730 458 aa23.58■■□□□ 1.36
NEIL3-202ENST00000513321 ZNF200P98182 395 aaPredicted RBP23.58■■□□□ 1.36
NEIL3-202ENST00000513321 PRKCEQ02156 737 aa23.58■■□□□ 1.36
NEIL3-202ENST00000513321 FAAP100Q0VG06 881 aa23.58■■□□□ 1.36
NEIL3-202ENST00000513321 STK38Q15208 465 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms