RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 MARK3P27448 753 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 PALMO75781 387 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 PSMC6P62333 389 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 SEPT7Q16181 437 aaKnown RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 SEPT9Q9UHD8 586 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 MRFAP1Q9Y605 127 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 RNF225M0QZC1 329 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 CD19P15391 556 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 GRB10Q13322 594 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 CASP8Q14790 479 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 MTERF2Q49AM1 385 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 METTL13Q8N6R0 699 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 SUPT20HQ8NEM7 779 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 COL16A1Q07092 1604 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 ROBO1Q9Y6N7 1651 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 HEXIM1O94992 359 aaKnown RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 GCFC2P16383 781 aaKnown RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 ALKBH5Q6P6C2 394 aaKnown RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 SAAL1Q96ER3 474 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 UBE2TQ9NPD8 197 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 PRR12Q9ULL5 1215 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 FOSP01100 380 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 GTF2A1P52655 376 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 PPP4CP60510 307 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-207ENST00000512462 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
PRDM16-207ENST00000512462 SLC16A4O15374 487 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 SRGNP10124 158 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 NF2P35240 595 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 RIC8AQ9NPQ8 531 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 PPANQ9NQ55 473 aaKnown RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 LRP6O75581 1613 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 PSMD14O00487 310 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 NOP56O00567 594 aaKnown RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 BRD3Q15059 726 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 NFU1Q9UMS0 254 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 NR3C1P04150 777 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 ZNF18P17022 549 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 SLC20A2Q08357 652 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 FUT2Q10981 343 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 MICALL1Q8N3F8 863 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 RETREG2Q8NC44 543 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 MTRQ99707 1265 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
PRDM16-207ENST00000512462 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-207ENST00000512462 TMEM150BA6NC51 233 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 N4BP1O75113 896 aaKnown RBP13.02□□□□□ -0.32
PRDM16-207ENST00000512462 MED24O75448 989 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 MMP14P50281 582 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 DGKZQ13574 1117 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 SNX1Q13596 522 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 RASA3Q14644 834 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 MGARPQ8TDB4 240 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 IFT74Q96LB3 600 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 ZHX2Q9Y6X8 837 aa13.02□□□□□ -0.32
PRDM16-207ENST00000512462 IPO5O00410 1097 aaKnown RBP13.02□□□□□ -0.33
PRDM16-207ENST00000512462 RHBDL3P58872 404 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 MYL7Q01449 175 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 LRRC63Q05C16 580 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-207ENST00000512462 LDHDQ86WU2 507 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 USP20Q9Y2K6 914 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms