RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 TUT1Q9H6E5 874 aaKnown RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 AGO3Q9H9G7 860 aaKnown RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 TELO2Q9Y4R8 837 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 FANCMQ8IYD8 2048 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 EIF3JO75822 258 aaKnown RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 NR3C2P08235 984 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 PDHBP11177 359 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 UBA1P22314 1058 aaKnown RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 ATXN1P54253 815 aaKnown RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 RUBCNQ92622 972 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 TMEM47Q9BQJ4 181 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
NUP54-211ENST00000512151 FRYLO94915 3013 aa10.69□□□□□ -0.7
NUP54-211ENST00000512151 HIDE1A8MVS5 230 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 FOXP2O15409 715 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 RNF113AO15541 343 aaKnown RBP10.68□□□□□ -0.7
NUP54-211ENST00000512151 GNAT2P19087 354 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 FBXO47Q5MNV8 452 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 ARHGEF16Q5VV41 709 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 PLPP4Q5VZY2 271 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 KANK3Q6NY19 840 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 NPAS4Q8IUM7 802 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 SIRT2Q8IXJ6 389 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
NUP54-211ENST00000512151 FGF18O76093 207 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 CD52P31358 61 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 UBE3AQ05086 875 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 ZDHHC14Q8IZN3 488 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 KBTBD3Q8NAB2 608 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 SUMF1Q8NBK3 374 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 RASGRP4Q8TDF6 673 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 UBA5Q9GZZ9 404 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
NUP54-211ENST00000512151 CACNA1IQ9P0X4 2223 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 DCDC2BA2VCK2 349 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 RANBP6O60518 1105 aaKnown RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 SLC3A2P08195 630 aaKnown RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 TOP1P11387 765 aaKnown RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 MYCLP12524 364 aaPredicted RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 HOXB8P17481 243 aaPredicted RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 SIX5Q8N196 739 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 RTP3Q9BQQ7 232 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 NAPBQ9H115 298 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 ADAM7Q9H2U9 754 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 TMEM260Q9NX78 707 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 DOCK5Q9H7D0 1870 aa10.66□□□□□ -0.7
NUP54-211ENST00000512151 FNDC1Q4ZHG4 1894 aaPredicted RBP10.66□□□□□ -0.7
NUP54-211ENST00000512151 OPLAHO14841 1288 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
NUP54-211ENST00000512151 SP9P0CG40 484 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 GOLGA8HP0CJ92 632 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 SRGAP2BP0DMP2 458 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 SNHG28P0DPA3 235 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
NUP54-211ENST00000512151 TSHZ3Q63HK5 1081 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 TDRD5Q8NAT2 981 aaKnown RBP10.65□□□□□ -0.7
NUP54-211ENST00000512151 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 ZBTB10Q96DT7 871 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 PDCD2LQ9BRP1 358 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 CDY2AQ9Y6F7 541 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 ABCB11O95342 1321 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
NUP54-211ENST00000512151 FSD2A1L4K1 749 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 KRBA1A5PL33 1030 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 ADRB1P08588 477 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 GNAT1P11488 350 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 SCG2P13521 617 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.71
NUP54-211ENST00000512151 MMRN1Q13201 1228 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 RARS2Q5T160 578 aaKnown RBP10.65□□□□□ -0.71
NUP54-211ENST00000512151 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.71
NUP54-211ENST00000512151 THNSL1Q8IYQ7 743 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 DNAJB3Q8WWF6 145 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 COL26A1Q96A83 441 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 NECTIN4Q96NY8 510 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 TMX1Q9H3N1 280 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 MLXIPQ9HAP2 919 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.71
NUP54-211ENST00000512151 KAT6AQ92794 2004 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms