RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 H0YC42 278 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 BUB1O43683 1085 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 CRKP46108 304 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 SMTNP53814 917 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 GRM4Q14833 912 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 NXNQ6DKJ4 435 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 CACYBPQ9HB71 228 aaKnown RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 BMP3P12645 472 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 ADRA2BP18089 450 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 EEF1GP26641 437 aaKnown RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 GRIN1Q05586 938 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 TUBB2AQ13885 445 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 FBXO33Q7Z6M2 555 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 DPF2Q92785 391 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 TUBB2BQ9BVA1 445 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 MAGEF1Q9HAY2 307 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 MED4Q9NPJ6 270 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 SH3GLB2Q9NR46 395 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 C21orf2O43822 256 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 MMS22LQ6ZRQ5 1243 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 DPH6Q7L8W6 267 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 ZNF513Q8N8E2 541 aaPredicted RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
CPNE4-209ENST00000512055 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 CTNNA1P35221 906 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 HP1BP3Q5SSJ5 553 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 IMPG2Q9BZV3 1241 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 FGFR2P21802 821 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 BAG6P46379 1132 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 MFSD4BQ5TF39 518 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 DENND2CQ68D51 928 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 SMCR8Q8TEV9 937 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 MAP3K7O43318 606 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 SPOPO43791 374 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 GH2P01242 217 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 TBC1D10BQ4KMP7 808 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 HOMER3Q9NSC5 361 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 USP17L10C9JJH3 530 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 TEX33O43247 280 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 FLOT1O75955 427 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 FNBP1Q96RU3 617 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 BARHL2Q9NY43 387 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 MCF2LO15068 1137 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 FOSP01100 380 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-209ENST00000512055 AKR1B1P15121 316 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 PRCPP42785 496 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 BLVRAP53004 296 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 KIF22Q14807 665 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 HAUS4Q9H6D7 363 aa11.73□□□□□ -0.53
CPNE4-209ENST00000512055 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 GNA14O95837 355 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 CCNE1P24864 410 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 KLHL29Q96CT2 875 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 LRGUKQ96M69 825 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 PHF20Q9BVI0 1012 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms