RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 MTMR9Q96QG7 549 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 TEKT3Q9BXF9 490 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 AP5M1Q9H0R1 490 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 TMEM60Q9H2L4 133 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 JPH1Q9HDC5 661 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 CLIC4Q9Y696 253 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 GRIN2DO15399 1336 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 PRUNE2Q8WUY3 3088 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 GRXCR1A8MXD5 290 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 DYNC1LI2O43237 492 aaPredicted RBP22.05■■□□□ 1.12
SMAD1-211ENST00000512019 FOSL2P15408 326 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 CYP2C18P33260 490 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 PRPHP41219 470 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
SMAD1-211ENST00000512019 KRT85P78386 507 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 ARHGAP1Q07960 439 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 PPIGQ13427 754 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMAD1-211ENST00000512019 GRIN2CQ14957 1233 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 FSCN1Q16658 493 aaKnown RBP22.05■■□□□ 1.12
SMAD1-211ENST00000512019 CYFIP1Q7L576 1253 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 OR6J1Q8NGC5 347 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 HAS1Q92839 578 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 FTOQ9C0B1 505 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMAD1-211ENST00000512019 UMODL1Q5DID0 1318 aa22.05■■□□□ 1.12
SMAD1-211ENST00000512019 TMEM265A0A087WTH1 108 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 TLR3O15455 904 aaKnown RBP22.04■■□□□ 1.12
SMAD1-211ENST00000512019 KRT76Q01546 638 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 CEBPZQ03701 1054 aaKnown RBP22.04■■□□□ 1.12
SMAD1-211ENST00000512019 TMEM266Q2M3C6 531 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 ARL6IP4Q66PJ3 421 aaKnown RBP22.04■■□□□ 1.12
SMAD1-211ENST00000512019 C4orf32Q8N8J7 132 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 SLC43A3Q8NBI5 491 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 COPS5Q92905 334 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 SPATA33Q96N06 139 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 UIMC1Q96RL1 719 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 SLC9A2Q9UBY0 812 aa22.04■■□□□ 1.12
SMAD1-211ENST00000512019 DDX39AO00148 427 aaKnown RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 NOP56O00567 594 aaKnown RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 DHX15O43143 795 aaKnown RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 PSMD10O75832 226 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 YEATS4O95619 227 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 NCLP19338 710 aaKnown RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 PBX2P40425 430 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 TXKP42681 527 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 PSMC6P62333 389 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 STK38Q15208 465 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 BRDTQ58F21 947 aaPredicted RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 RASIP1Q5U651 963 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 ZNF365Q70YC5 407 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 TMEM199Q8N511 208 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 PPTC7Q8NI37 304 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 TFIP11Q9UBB9 837 aaKnown RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 PCDHA12Q9UN75 941 aa22.03■■□□□ 1.12
SMAD1-211ENST00000512019 MORC2Q9Y6X9 1032 aaPredicted RBP22.03■■□□□ 1.12
SMAD1-211ENST00000512019 SORBS3O60504 671 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 CPT1AP50416 773 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 ITGA7Q13683 1181 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 SLC39A14Q15043 492 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 PTPAQ15257 358 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 ZNF746Q6NUN9 644 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-211ENST00000512019 SMAP1Q8IYB5 467 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-211ENST00000512019 GJA10Q969M2 543 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 RAB34Q9BZG1 259 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 TTC12Q9H892 705 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-211ENST00000512019 VAV3Q9UKW4 847 aa22.02■■□□□ 1.12
SMAD1-211ENST00000512019 SCN5AQ14524 2016 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 SFNP31947 248 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 SP4Q02446 784 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 PPP2R5CQ13362 524 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 DTHD1Q6ZMT9 781 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 LINC00301Q8NCQ3 95 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 KCNG4Q8TDN1 519 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 TIFAQ96CG3 184 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 PBX4Q9BYU1 374 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 SCAND2PQ9GZW5 306 aaPredicted RBP22.01■■□□□ 1.11
SMAD1-211ENST00000512019 ZNF576Q9H609 170 aa22.01■■□□□ 1.11
SMAD1-211ENST00000512019 WDR64B1ANS9 1081 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 CHMP2AO43633 222 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 CABYRO75952 493 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 FXR2P51116 673 aaKnown RBP eCLIP22■■□□□ 1.11
SMAD1-211ENST00000512019 JAK3P52333 1124 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 ACTR2P61160 394 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 USP38Q8NB14 1042 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 RDM1Q8NG50 284 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 AFG1LQ8WV93 481 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 TRPV6Q9H1D0 765 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 UNC45AQ9H3U1 944 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 BCAS3Q9H6U6 928 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 IL23AQ9NPF7 189 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 DOCK5Q9H7D0 1870 aa22■■□□□ 1.11
SMAD1-211ENST00000512019 A6NJR5 290 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 SPTLC2O15270 562 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 ZEB2O60315 1214 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 B4GALT4O60513 344 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 CCNE2O96020 404 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 HSDL1Q3SXM5 330 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 PSRC1Q6PGN9 363 aaPredicted RBP21.99■■□□□ 1.11
SMAD1-211ENST00000512019 TNPO1Q92973 898 aaKnown RBP21.99■■□□□ 1.11
SMAD1-211ENST00000512019 SPATA32Q96LK8 384 aa21.99■■□□□ 1.11
SMAD1-211ENST00000512019 GPR20Q99678 358 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms