RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PCDHB3Q9Y5E6 796 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ITIH6Q6UXX5 1313 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 RRN3P2A6NIE6 340 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 NCAM2O15394 837 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 CLASP2O75122 1294 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 AKR1B1P15121 316 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 DPEP1P16444 411 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 FERP16591 822 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 EIF1AXP47813 144 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 GJA9P57773 515 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ST5P78524 1137 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 AP1B1Q10567 949 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 INTS11Q5TA45 600 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 HEATR6Q6AI08 1181 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 SHQ1Q6PI26 577 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ABRAXAS1Q6UWZ7 409 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 C4orf50Q6ZRC1 276 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ERMP1Q7Z2K6 904 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 MYCT1Q8N699 235 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 FAM169BQ8N8A8 192 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 HDAC2Q92769 488 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 RMDN3Q96TC7 470 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 NOL10Q9BSC4 688 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 TARS2Q9BW92 718 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 NAA15Q9BXJ9 866 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 TEX13BQ9BXU2 312 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 MAK16Q9BXY0 300 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ADAM33Q9BZ11 813 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPARGC1AQ9UBK2 798 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 COLQQ9Y215 455 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 BCS1LQ9Y276 419 aa5.59□□□□□ -1.51
TRAPPC11-208ENST00000511955 ABCC12Q96J65 1359 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARPC4-TTLL3A0A0A6YYG9 625 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 FSD2A1L4K1 749 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 FAM221AA4D161 298 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 DDX11L8A8MPP1 907 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 GSG1L2A8MUP6 293 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 F8VZ95 297 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 M0QX08 132 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 TLR5O60602 858 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 APBB3O95704 486 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 IGKV5-2P06315 115 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SFTPCP11686 197 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 NPR3P17342 541 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CA8P35219 290 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CTCFP49711 727 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 AP2B1P63010 937 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PABPC4Q13310 644 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 AP3B2Q13367 1082 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 GPR162Q16538 588 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PLA2G4EQ3MJ16 856 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PADI6Q6TGC4 694 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 C3orf67Q6ZVT6 689 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 RAPH1Q70E73 1250 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 UBE3BQ7Z3V4 1068 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPP1R42Q7Z4L9 355 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLC51AQ86UW1 340 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 C2CD5Q86YS7 1000 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC65Q8IXS2 484 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF34Q8IZ26 560 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRC43Q8N309 656 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 GOLGA6L1Q8N7Z2 621 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 FAM184AQ8NB25 1140 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 UTP15Q8TED0 518 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CLIP3Q96DZ5 547 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 KIF1BPQ96EK5 621 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 C7orf25Q9BPX7 421 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 UTP14AQ9BVJ6 771 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 GRPEL1Q9HAV7 217 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZFYVE28Q9HCC9 887 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 MAN1C1Q9NR34 630 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 DISC1Q9NRI5 854 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 KRT82Q9NSB4 513 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CHMP5Q9NZZ3 219 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 TBC1D7Q9P0N9 293 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 STIM2Q9P246 746 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 FAM184BQ9ULE4 1060 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CNPY2Q9Y2B0 182 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SCN7AQ01118 1682 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 QSER1Q2KHR3 1735 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 H3BRJ5 948 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CASQ2O14958 399 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPP1R12BO60237 982 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 TGDSO95455 350 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 NTSR2O95665 410 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 RPS6KB1P23443 525 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SKIV2L2P42285 1042 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 AK2P54819 239 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 NRLP54845 237 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 EVCP57679 992 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PTPN21Q16825 1174 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 WSCD2Q2TBF2 565 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CNNM4Q6P4Q7 775 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PACS1Q6VY07 963 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms