RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 SLC37A4O43826 429 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 PQBP1O60828 265 aaKnown RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 SMC2O95347 1197 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 TDP2O95551 362 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 FOSL2P15408 326 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 TAL1P17542 331 aaPredicted RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 POSTNQ15063 836 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 E2F4Q16254 413 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 CT47A1Q5JQC4 288 aaPredicted RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 USP49Q70CQ1 688 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 SPATA20Q8TB22 786 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 FAM200AQ8TCP9 573 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 ANP32BQ92688 251 aaKnown RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 MMP19Q99542 508 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 PCDHA12Q9UN75 941 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 MCM3APO60318 1980 aa11.7□□□□□ -0.54
HOXA4-203ENST00000511914 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
HOXA4-203ENST00000511914 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 CLTBP09497 229 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 RARBP10826 455 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 ALAS1P13196 640 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 COPB2P35606 906 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 EPHB4P54760 987 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 SMAD3P84022 425 aaKnown RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 CPXCR1Q8N123 301 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 ETNPPLQ8TBG4 499 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 HAS1Q92839 578 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 CALML4Q96GE6 196 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 GSDMAQ96QA5 445 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 BPIFA3Q9BQP9 254 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 FBXO40Q9UH90 709 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 SERTAD1Q9UHV2 236 aa11.69□□□□□ -0.54
HOXA4-203ENST00000511914 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
HOXA4-203ENST00000511914 GBF1Q92538 1859 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 A0A087X0B3 334 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 A0A1W2PQ45 241 aaPredicted RBP11.68□□□□□ -0.54
HOXA4-203ENST00000511914 A0A1W2PQY0 241 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 MARCH6O60337 910 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 RAG1P15918 1043 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 ZNF76P36508 570 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 STAT3P40763 770 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 TECP42680 631 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 TXKP42681 527 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 NLRP12P59046 1061 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 SETQ01105 290 aaPredicted RBP11.68□□□□□ -0.54
HOXA4-203ENST00000511914 AMPD3Q01432 767 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 KCTD2Q14681 263 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 HYIQ5T013 277 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
HOXA4-203ENST00000511914 RNF180Q86T96 592 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 CABP7Q86V35 215 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 PDILTQ8N807 584 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 RNF166Q96A37 237 aaPredicted RBP11.68□□□□□ -0.54
HOXA4-203ENST00000511914 LENG9Q96B70 501 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 DHX58Q96C10 678 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 PAGE5Q96GU1 130 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 TINF2Q9BSI4 451 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
HOXA4-203ENST00000511914 KDM3AQ9Y4C1 1321 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 IGLV3-22A0A075B6J6 115 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 MEIS1O00470 390 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 NFIBO00712 420 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
HOXA4-203ENST00000511914 SLC25A27O95847 323 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 MUTP22033 750 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 STAT6P42226 847 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 ZNF165P49910 485 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 ANO6Q4KMQ2 910 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 CEP55Q53EZ4 464 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 PRR16Q569H4 304 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 C1orf53Q5VUE5 145 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 PCNX4Q63HM2 1172 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 SNRNP48Q6IEG0 339 aaKnown RBP11.67□□□□□ -0.54
HOXA4-203ENST00000511914 RIOX2Q8IUF8 465 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 MLKLQ8NB16 471 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 SYTL5Q8TDW5 730 aaPredicted RBP11.67□□□□□ -0.54
HOXA4-203ENST00000511914 TBC1D5Q92609 795 aa11.67□□□□□ -0.54
HOXA4-203ENST00000511914 SMARCE1Q969G3 411 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms