RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
COPS4-211ENST00000511891 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
COPS4-211ENST00000511891 NID2Q14112 1375 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 LGR5O75473 907 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 SREBF1P36956 1147 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 ADAM17P78536 824 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 AP3B2Q13367 1082 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 CCDC85BQ15834 202 aaPredicted RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 NTRK3Q16288 839 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS4-211ENST00000511891 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 GLG1Q92896 1179 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 SLC26A6Q9BXS9 759 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 UPF3BQ9BZI7 483 aaKnown RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 AGO4Q9HCK5 861 aaKnown RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 JPH1Q9HDC5 661 aaPredicted RBP11.3□□□□□ -0.6
COPS4-211ENST00000511891 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
COPS4-211ENST00000511891 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ABHD14A-ACY1A0A1B0GW23 586 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 KIF28PB7ZC32 967 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 FAM86B1E9PN63 330 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 DDX39AO00148 427 aaKnown RBP11.29□□□□□ -0.6
COPS4-211ENST00000511891 MAFGO15525 162 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 TLL1O43897 1013 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 FAM86B2P0C5J1 330 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 GNAT1P11488 350 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ZNF76P36508 570 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ACTR2P61160 394 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 TAP1Q03518 808 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 IKBKEQ14164 716 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 GRIK4Q16099 956 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 FAM117BQ6P1L5 589 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 SMARCAD1Q9H4L7 1026 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ERAP1Q9NZ08 941 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
COPS4-211ENST00000511891 ESYT2A0FGR8 921 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 MEIS1O00470 390 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 CCNE2O96020 404 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 EVCP57679 992 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 IGBP1P78318 339 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
COPS4-211ENST00000511891 STK3Q13188 491 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 PLEKHG4Q58EX7 1191 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 PLA2G4DQ86XP0 818 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 ARNTL2Q8WYA1 636 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
COPS4-211ENST00000511891 C6orf50Q9HD87 102 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 NFASCO94856 1347 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 EMSYQ7Z589 1322 aa11.28□□□□□ -0.6
COPS4-211ENST00000511891 EPB41L2O43491 1005 aaKnown RBP11.27□□□□□ -0.61
COPS4-211ENST00000511891 DTNBO60941 627 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 CAND2O75155 1236 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 GJB5O95377 273 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 CHRNA1P02708 482 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 INSRRP14616 1297 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 IFNAR1P17181 557 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 KRT40Q6A162 431 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 REXO1Q8N1G1 1221 aaKnown RBP11.27□□□□□ -0.61
COPS4-211ENST00000511891 CCDC12Q8WUD4 166 aaPredicted RBP11.27□□□□□ -0.61
COPS4-211ENST00000511891 TRAPPC12Q8WVT3 735 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 CRYGNQ8WXF5 182 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 SEPT8Q92599 483 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 RNF26Q9BY78 433 aaPredicted RBP11.27□□□□□ -0.61
COPS4-211ENST00000511891 AZI2Q9H6S1 392 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
COPS4-211ENST00000511891 IGLV3-22A0A075B6J6 115 aa11.26□□□□□ -0.61
COPS4-211ENST00000511891 MBLAC1A4D2B0 266 aaPredicted RBP11.26□□□□□ -0.61
COPS4-211ENST00000511891 DHX15O43143 795 aaKnown RBP11.26□□□□□ -0.61
COPS4-211ENST00000511891 EFCAB14O75071 495 aa11.26□□□□□ -0.61
COPS4-211ENST00000511891 CYP3A4P08684 503 aa11.26□□□□□ -0.61
COPS4-211ENST00000511891 GHRP10912 638 aa11.26□□□□□ -0.61
COPS4-211ENST00000511891 GNA11P29992 359 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms