RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NEDD9Q14511 834 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 PAN2Q504Q3 1202 aaKnown RBP22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 MARCH8Q5T0T0 291 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 SAMD3Q8N6K7 520 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 POF1BQ8WVV4 589 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 DNAJB3Q8WWF6 145 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 CDY2AQ9Y6F7 541 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 NRCAMQ92823 1304 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 PDGFBP01127 241 aaPredicted RBP22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 CD52P31358 61 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 SIGLEC14Q08ET2 396 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 TICAM2Q86XR7 235 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 RILPL2Q969X0 211 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 RPGRIP1Q96KN7 1286 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 PRRX2Q99811 253 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 RIOX1Q9H6W3 641 aa22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 ZNF215Q9UL58 517 aaPredicted RBP22.01■■□□□ 1.11
HMGCS1-206ENST00000511774 MYO10Q9HD67 2058 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 GVINP1Q7Z2Y8 2422 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 FIBPO43427 364 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 AVPR2P30518 371 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 PKN1Q16512 942 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 GNPTABQ3T906 1256 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 IFIT1BQ5T764 474 aaKnown RBP22■■□□□ 1.11
HMGCS1-206ENST00000511774 CMTR2Q8IYT2 770 aaKnown RBP22■■□□□ 1.11
HMGCS1-206ENST00000511774 PHF7Q9BWX1 381 aaPredicted RBP22■■□□□ 1.11
HMGCS1-206ENST00000511774 SENP2Q9HC62 589 aa22■■□□□ 1.11
HMGCS1-206ENST00000511774 FNDC1Q4ZHG4 1894 aaPredicted RBP22■■□□□ 1.11
HMGCS1-206ENST00000511774 MBLAC1A4D2B0 266 aaPredicted RBP21.99■■□□□ 1.11
HMGCS1-206ENST00000511774 MARK3P27448 753 aa21.99■■□□□ 1.11
HMGCS1-206ENST00000511774 TAF2Q6P1X5 1199 aa21.99■■□□□ 1.11
HMGCS1-206ENST00000511774 TSHZ1Q6ZSZ6 1077 aa21.99■■□□□ 1.11
HMGCS1-206ENST00000511774 SUSD6Q92537 303 aa21.99■■□□□ 1.11
HMGCS1-206ENST00000511774 PER2O15055 1255 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 ATP9AO75110 1047 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 TCF7P36402 384 aaPredicted RBP21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 NT5C2P49902 561 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 PPFIA1Q13136 1202 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 GRIK4Q16099 956 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 CWC27Q6UX04 472 aaKnown RBP21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 ATP8B4Q8TF62 1192 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 UBAC1Q9BSL1 405 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 TUBE1Q9UJT0 475 aa21.98■■□□□ 1.11
HMGCS1-206ENST00000511774 GSTTP1A0A1W2PQM5 241 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 H0Y858 1186 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 MFAP1P55081 439 aaKnown RBP21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 GRM4Q14833 912 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 NAALADL2Q58DX5 795 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 NPAS4Q8IUM7 802 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 ATOH1Q92858 354 aaPredicted RBP21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 SENP7Q9BQF6 1050 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 IL25Q9H293 177 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 TLR9Q9NR96 1032 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 HCSTQ9UBK5 93 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 CACNA1AO00555 2505 aa21.97■■□□□ 1.11
HMGCS1-206ENST00000511774 PPFIA3O75145 1194 aa21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 STAM2O75886 525 aa21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 MRPS6P82932 125 aaKnown RBP21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 PPP2R3CQ969Q6 453 aa21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 LNPKQ9C0E8 428 aa21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 TMX1Q9H3N1 280 aa21.96■■□□□ 1.11
HMGCS1-206ENST00000511774 PNMA6FA0A0J9YX94 578 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 KCNA2P16389 499 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 TMEM62Q0P6H9 643 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 PTPN21Q16825 1174 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 USP17L6PQ6QN14 398 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 ASCL5Q7RTU5 278 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 DSCC1Q9BVC3 393 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 KRT23Q9C075 422 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 FAM49AQ9H0Q0 323 aaPredicted RBP21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 TLE6Q9H808 572 aa21.95■■□□□ 1.1
HMGCS1-206ENST00000511774 ATF7P17544 494 aaPredicted RBP21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 ERVFC1P60507 584 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 IGBP1P78318 339 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 PCNX4Q63HM2 1172 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 RSPH3Q86UC2 560 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 PCYT2Q99447 389 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 S1PR5Q9H228 398 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 ZBTB47Q9UFB7 747 aaPredicted RBP21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 CDH22Q9UJ99 828 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 PADI3Q9ULW8 664 aa21.94■■□□□ 1.1
HMGCS1-206ENST00000511774 ZNF292O60281 2723 aa21.93■■□□□ 1.1
HMGCS1-206ENST00000511774 KCNC3Q14003 757 aa21.93■■□□□ 1.1
HMGCS1-206ENST00000511774 PROB1E7EW31 1015 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 MEIS2O14770 477 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 MGEA5O60502 916 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 SCG2P13521 617 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 IBSPP21815 317 aaPredicted RBP21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 SP100P23497 879 aaPredicted RBP21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 DUSP6Q16828 381 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 TRAPPC12Q8WVT3 735 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 APOL5Q9BWW9 433 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 CNNM2Q9H8M5 875 aa21.92■■□□□ 1.1
HMGCS1-206ENST00000511774 INSRRP14616 1297 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 ITGB5P18084 799 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 TROAPQ12815 778 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 TMEM266Q2M3C6 531 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms