RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
COPS4-209ENST00000511653 KIF4AO95239 1232 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 SLC25A27O95847 323 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 CLTBP09497 229 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 ATP5JP18859 108 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 STAT3P40763 770 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
COPS4-209ENST00000511653 SMAD3P84022 425 aaKnown RBP7.95□□□□□ -1.14
COPS4-209ENST00000511653 KCTD2Q14681 263 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 CTR9Q6PD62 1173 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 SYT9Q86SS6 491 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 STK11IPQ8N1F8 1099 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 CCDC17Q96LX7 622 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 HAUS7Q99871 368 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 ZKSCAN3Q9BRR0 538 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 IGFLR1Q9H665 355 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 ZBTB40Q9NUA8 1239 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 RIPK3Q9Y572 518 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 SLC4A4Q9Y6R1 1079 aa7.95□□□□□ -1.14
COPS4-209ENST00000511653 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 KIAA0355O15063 1070 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 MAP3K6O95382 1288 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 AKR1A1P14550 325 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 EIF4BP23588 611 aaKnown RBP7.94□□□□□ -1.14
COPS4-209ENST00000511653 FANCCQ00597 558 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 UBE3CQ15386 1083 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 RNF180Q86T96 592 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 USP38Q8NB14 1042 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 RNPC3Q96LT9 517 aaKnown RBP7.94□□□□□ -1.14
COPS4-209ENST00000511653 FGD4Q96M96 766 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 SUV39H2Q9H5I1 410 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 NRBP1Q9UHY1 535 aa7.94□□□□□ -1.14
COPS4-209ENST00000511653 SCN5AQ14524 2016 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 SMARCA5O60264 1052 aaPredicted RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 HMMRO75330 724 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 SNAI1O95863 264 aaPredicted RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 NDUFB10O96000 172 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 PSAPP07602 524 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 USP17L7P0C7H9 530 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 FOSL2P15408 326 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 RAG1P15918 1043 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 ACLYP53396 1101 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 FGD1P98174 961 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 FAAP100Q0VG06 881 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 KIAA0319Q5VV43 1072 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 SNRNP48Q6IEG0 339 aaKnown RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 RPAP2Q8IXW5 612 aaPredicted RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 CEP120Q8N960 986 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 KLHDC9Q8NEP7 349 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 TCF12Q99081 682 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 SLF1Q9BQI6 1058 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 TEX13BQ9BXU2 312 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.93□□□□□ -1.14
COPS4-209ENST00000511653 KANSL2Q9H9L4 492 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 ZHX1Q9UKY1 873 aaPredicted RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 DIS3Q9Y2L1 958 aaKnown RBP7.93□□□□□ -1.14
COPS4-209ENST00000511653 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 PIEZO1Q92508 2521 aa7.93□□□□□ -1.14
COPS4-209ENST00000511653 DNAJC25-GNG10A0A024R161 153 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 GSG1L2A8MUP6 293 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 RAB11FIP3O75154 756 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 ATP11AP98196 1134 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 FPGSQ05932 587 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TBC1D8BQ0IIM8 1120 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TSHZ3Q63HK5 1081 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 CCSAPQ6IQ19 270 aaPredicted RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 AMOTL1Q8IY63 956 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 STARD7Q9NQZ5 370 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TMEM39AQ9NV64 488 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 ARPP21Q9UBL0 812 aaPredicted RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 TBX21Q9UL17 535 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 DDX19BQ9UMR2 479 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TCF20Q9UGU0 1960 aaKnown RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 IGKV6D-41A0A0C4DH26 115 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 F5H6K3 240 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 PRDM1O75626 825 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 PTGS1P23219 599 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 COPB2P35606 906 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 SOX18P35713 384 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 PLAURQ03405 335 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 KLRC3Q07444 240 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 KCNA10Q16322 511 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 ZNF468Q5VIY5 522 aaPredicted RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 ANKRD33Q7Z3H0 272 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 CPXCR1Q8N123 301 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 LRRC47Q8N1G4 583 aaKnown RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 OSBP2Q969R2 916 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 PMEPA1Q969W9 287 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 CRELD1Q96HD1 420 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 STRBPQ96SI9 672 aaKnown RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 OSMRQ99650 979 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.14
COPS4-209ENST00000511653 ABCB6Q9NP58 842 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms