RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SSRP1Q08945 709 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 EZH2Q15910 746 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 DPY19L1Q2PZI1 675 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 WWC2Q6AWC2 1192 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 LILRB2Q8N423 598 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 ZNF526Q8TF50 670 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 SPATA9Q9BWV2 254 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 NKX2-4Q9H2Z4 354 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 PFDN2Q9UHV9 154 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 TMEM2Q9UHN6 1383 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 TET3O43151 1660 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 KDM2BQ8NHM5 1336 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 PRICKLE3O43900 615 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 SMARCA5O60264 1052 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 HOXC12P31275 282 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 MC3RP41968 323 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 GRIA2P42262 883 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 SARSP49591 514 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 ZNF827Q17R98 1081 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 ZXDCQ2QGD7 858 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 GTF2IRD2BQ6EKJ0 949 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 NOP9Q86U38 636 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 GTF2IRD2Q86UP8 949 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 DCP2Q8IU60 420 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 SMARCC2Q8TAQ2 1214 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 BTN2A2Q8WVV5 523 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 COPS5Q92905 334 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 PLA2G2DQ9UNK4 145 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 MYOM1P52179 1685 aa5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 TNS1Q9HBL0 1735 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-208ENST00000511439 A0A1B0GTL3 188 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 CYP2C8P10632 490 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 DLX2Q07687 328 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 CYP4F3Q08477 520 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 HSP90AA2PQ14568 343 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 LONRF2Q1L5Z9 754 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 UNC5CLQ8IV45 518 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 ADGRG2Q8IZP9 1017 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 ZBTB38Q8NAP3 1195 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 THAP3Q8WTV1 239 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 CCDC140Q96MF4 163 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 CAMKK2Q96RR4 588 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 SYT17Q9BSW7 474 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 AARSD1Q9BTE6 412 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 AP5M1Q9H0R1 490 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 GULP1Q9UBP9 304 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 COL22A1Q8NFW1 1626 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-208ENST00000511439 RREB1Q92766 1687 aa5.21□□□□□ -1.57
TOPBP1-208ENST00000511439 NUP188Q5SRE5 1749 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 C7orf72A4D263 438 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 KIF3BO15066 747 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 NOBOXO60393 691 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 SCG5P05408 212 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 FAM153BP0C7A2 387 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 FGFR1P11362 822 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 GFRA1P56159 465 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 SCRN1Q12765 414 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 SF1Q15637 639 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 GPR162Q16538 588 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 GGNQ86UU5 652 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 LINC00482Q8N8I6 264 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 ZBTB8AQ96BR9 441 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 MMP19Q99542 508 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 GPR20Q99678 358 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 RXFP1Q9HBX9 757 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 MST1RQ04912 1400 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 ATP10DQ9P241 1426 aa5.21□□□□□ -1.58
TOPBP1-208ENST00000511439 MYOM2P54296 1465 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 RPRD2Q5VT52 1461 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 DHX29Q7Z478 1369 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 TRAV20A0A0B4J274 112 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 CPP00450 1065 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 SNRPB2P08579 225 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 CNR2P34972 360 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 C2orf27AQ580R0 203 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 YOD1Q5VVQ6 348 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 GIMAP6Q6P9H5 292 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 HHIPL2Q6UWX4 724 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 ETV3LQ6ZN32 361 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 FERMT3Q86UX7 667 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 FAM124AQ86V42 546 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 ZC3H18Q86VM9 953 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 RNPC3Q96LT9 517 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 IER2Q9BTL4 223 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 NGRNQ9NPE2 291 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 FBLN5Q9UBX5 448 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 FMN1Q68DA7 1419 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 PLEKHH2Q8IVE3 1493 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 PRXQ9BXM0 1461 aa5.2□□□□□ -1.58
TOPBP1-208ENST00000511439 SLIT2O94813 1529 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 EFCAB6Q5THR3 1501 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 DLX3O60479 287 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms