RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MBLAC1A4D2B0 266 aaPredicted RBP13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 ACTN1P12814 892 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 STAT5BP51692 787 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 GRIK4Q16099 956 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 TCTN1Q2MV58 587 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 AZI2Q9H6S1 392 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 CYP3A7-CYP3A51PA0A087WV96 503 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 MSH4O15457 936 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 CAND2O75155 1236 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 INSRRP14616 1297 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 CYP3A7P24462 503 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 PLCB4Q15147 1175 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 RUFY4Q6ZNE9 571 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 TIFAQ96CG3 184 aa13.18□□□□□ -0.3
SH3RF1-205ENST00000511421 JAK2O60674 1132 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 XBP1P17861 261 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 Q4G0T1 1027 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 CNKSR3Q6P9H4 555 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 WASF1Q92558 559 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 OSBPL7Q9BZF2 842 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
SH3RF1-205ENST00000511421 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 TDP2O95551 362 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 CTSHP09668 335 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 ATP4AP20648 1035 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 SLC26A2P50443 739 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 RABGGTBP53611 331 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 KRT76Q01546 638 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 RAB30Q15771 203 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 INF2Q27J81 1249 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 CDX2Q99626 313 aaPredicted RBP13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 KAT6AQ92794 2004 aa13.16□□□□□ -0.3
SH3RF1-205ENST00000511421 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 BACH1O14867 736 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 IGBP1P78318 339 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 GJA10Q969M2 543 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 ZBTB10Q96DT7 871 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 RIT2Q99578 217 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 ZNF576Q9H609 170 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 ZNF302Q9NR11 478 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 MAFBQ9Y5Q3 323 aaPredicted RBP13.15□□□□□ -0.3
SH3RF1-205ENST00000511421 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 HBP1O60381 514 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 PSMD10O75832 226 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 CHRNA1P02708 482 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 MYOGP15173 224 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 MGAT3Q09327 533 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 GRIN2CQ14957 1233 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 TNFRSF25Q93038 417 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.31
SH3RF1-205ENST00000511421 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 COL6A3P12111 3177 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 PSAPP07602 524 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 DEFB103AP81534 67 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
SH3RF1-205ENST00000511421 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms