RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 STRN3Q13033 797 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PUM1Q14671 1186 aaKnown RBP eCLIP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM240Q5SV17 173 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 CEP85Q6P2H3 762 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 BLOC1S2Q6QNY1 142 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 RSPO2Q6UXX9 243 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 HEATR3Q7Z4Q2 680 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ITIH5Q86UX2 942 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PLA2G4DQ86XP0 818 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ADHFE1Q8IWW8 467 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ACER1Q8TDN7 264 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SDR42E1Q8WUS8 393 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 DDX27Q96GQ7 796 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 STRBPQ96SI9 672 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZSCAN10Q96SZ4 725 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 GTPBP4Q9BZE4 634 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PIH1D3Q9NQM4 214 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TUBE1Q9UJT0 475 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 EXOC7Q9UPT5 735 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SYNRGQ9UMZ2 1314 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TBC1D4O60343 1298 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PGK2P07205 417 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 EIF2AK2P19525 551 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SHMT1P34896 483 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 BMPR1AP36894 532 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 RFC5P40937 340 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SLC8A3P57103 927 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SP4Q02446 784 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF543Q08ER8 600 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 KARSQ15046 597 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 Q3C1V9 767 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 IER5LQ5T953 404 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 DAB2IPQ5VWQ8 1189 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SESTD1Q86VW0 696 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 DDX42Q86XP3 938 aaKnown RBP eCLIP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 THEM5Q8N1Q8 247 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 VGLL2Q8N8G2 317 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 APPL2Q8NEU8 664 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 NLRP7Q8WX94 980 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PSPC1Q8WXF1 523 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TSPAN18Q96SJ8 248 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PHF7Q9BWX1 381 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SRRTQ9BXP5 876 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 FAM49AQ9H0Q0 323 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 CYP26B1Q9NR63 512 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SLC9A2Q9UBY0 812 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 USP18Q9UMW8 372 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZMYM6O95789 1325 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TBKBP1A7MCY6 615 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 GPR37L1O60883 481 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZMYND10O75800 440 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 EOMESO95936 686 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 C1RP00736 705 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 MMP3P08254 477 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 MRPS6P82932 125 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 MXD4Q14582 209 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZMYM1Q5SVZ6 1142 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TSHZ1Q6ZSZ6 1077 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 NIPA1Q7RTP0 329 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF410Q86VK4 478 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 MCPH1Q8NEM0 835 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 CEP95Q96GE4 821 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PPP1R9BQ96SB3 815 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 PLEKHA4Q9H4M7 779 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 A1CFQ9NQ94 594 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF302Q9NR11 478 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 FAM13BQ9NYF5 915 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 HOOK1Q9UJC3 728 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 DBNLQ9UJU6 430 aaKnown RBP3.19□□□□□ -1.9
CLOCK-209ENST00000511124 TBX21Q9UL17 535 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 MAFFQ9ULX9 164 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SLC8A2Q9UPR5 921 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 FAN1Q9Y2M0 1017 aa3.19□□□□□ -1.9
CLOCK-209ENST00000511124 SPTLC1O15269 473 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ZW10O43264 779 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 IQCF3P0C7M6 154 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ACRP10323 421 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CNR2P34972 360 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RFX5P48382 616 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SNX16P57768 344 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 IGBP1P78318 339 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 MTMR1Q13613 665 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PRAMEF19Q5SWL8 479 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 BTNL9Q6UXG8 535 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RPAINQ86UA6 219 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 LCORLQ8N3X6 602 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 KCTD17Q8N5Z5 321 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF557Q8N988 423 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 FAM133AQ8N9E0 248 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 NPLOC4Q8TAT6 608 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 DEPTORQ8TB45 409 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 UCMAQ8WVF2 138 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ACDQ96AP0 544 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ELAC1Q9H777 363 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SFXN1Q9H9B4 322 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 JPH1Q9HDC5 661 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SORCS3Q9UPU3 1222 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PCDHB9Q9Y5E1 797 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 POTEB3A0JP26 581 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms