RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 LGSNQ5TDP6 509 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 H2AFVQ71UI9 128 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CEP57Q86XR8 500 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 KRT222Q8N1A0 295 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 TRIM58Q8NG06 486 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 DESI2Q9BSY9 194 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CPSF2Q9P2I0 782 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 GDAQ9Y2T3 454 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 WDR19Q8NEZ3 1342 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 KBTBD13C9JR72 458 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 MAN2A1Q16706 1144 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CPLX4Q7Z7G2 160 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 POTEDQ86YR6 584 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 PALM2Q8IXS6 379 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 TAB3Q8N5C8 712 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 MCPH1Q8NEM0 835 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CARD6Q9BX69 1037 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 TMEM39BQ9GZU3 492 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 BARHL2Q9NY43 387 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 H7C0C1 242 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 LDHAP00338 332 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ATP5OP48047 213 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 MXI1P50539 228 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 FKBP3Q00688 224 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 TTBK2Q6IQ55 1244 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ARMCX2Q7L311 632 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 MAP7D3Q8IWC1 876 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ELMOD1Q8N336 334 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 GPT2Q8TD30 523 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 FAM151AQ8WW52 585 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ZNF668Q96K58 619 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 FEZ2Q9UHY8 353 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CD2BP2O95400 341 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 CETPP11597 493 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 EEF1GP26641 437 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 HPDP32754 393 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ZNF568Q3ZCX4 644 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 OR6B2Q6IFH4 312 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 RNF139Q8WU17 664 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 TRIM11Q96F44 468 aa7.78□□□□□ -1.16
KDM3B-207ENST00000510866 BZW2Q9Y6E2 419 aaKnown RBP7.78□□□□□ -1.16
KDM3B-207ENST00000510866 KRIT1O00522 736 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 CLDN3O15551 220 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 ADCY8P40145 1251 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 TGFB2P61812 414 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 MESDQ14696 234 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 ADAT2Q7Z6V5 191 aaKnown RBP7.77□□□□□ -1.16
KDM3B-207ENST00000510866 BBS5Q8N3I7 341 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 STAG2Q8N3U4 1231 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 ARFGAP2Q8N6H7 521 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 OXER1Q8TDS5 423 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 ZNF653Q96CK0 615 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 FAM20AQ96MK3 541 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 KRT12Q99456 494 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 RAB17Q9H0T7 212 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 SLITRK6Q9H5Y7 841 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 GJB4Q9NTQ9 266 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 RWDD2AQ9UIY3 292 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 AFG3L2Q9Y4W6 797 aa7.77□□□□□ -1.16
KDM3B-207ENST00000510866 KIF3CO14782 793 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 DEFB129Q9H1M3 183 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 SUDS3Q9H7L9 328 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 CPSF3Q9UKF6 684 aaKnown RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 PHLPP2Q6ZVD8 1323 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 STK25O00506 426 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 CYP2B6P20813 491 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 CDC27P30260 824 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 RASSF7Q02833 373 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 AGBL3Q8NEM8 1001 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 PSPC1Q8WXF1 523 aaKnown RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 LPAR1Q92633 364 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 POLR3FQ9H1D9 316 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 TOPORSQ9NS56 1045 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 SAMD15Q9P1V8 674 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 A0A087WWV3 80 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 SLC16A4O15374 487 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 GFPT2O94808 682 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 P4HBP07237 508 aaKnown RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 PHLDB2Q86SQ0 1253 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 CTAGE3PQ8IX95 158 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 C17orf53Q8N3J3 647 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 GCOM2Q9BZD3 368 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 SLC9A2Q9UBY0 812 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 USP32Q8NFA0 1604 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 MYO1FO00160 1098 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 GMNNO75496 209 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 MAPK4P31152 587 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 QARSP47897 775 aaKnown RBP7.77□□□□□ -1.17
KDM3B-207ENST00000510866 VPS41P49754 854 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 KCNV1Q6PIU1 500 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 VPS52Q8N1B4 723 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 FAM76AQ8TAV0 307 aa7.77□□□□□ -1.17
KDM3B-207ENST00000510866 RAD54LQ92698 747 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms