RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 NIPA1Q7RTP0 329 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 TMCO2Q7Z6W1 182 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-203ENST00000510217 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.73□□□□□ -0.53
PFDN1-203ENST00000510217 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
PFDN1-203ENST00000510217 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-203ENST00000510217 PRUNE2Q8WUY3 3088 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 KAT6AQ92794 2004 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 NRCAMQ92823 1304 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 GAS2L1Q99501 681 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-203ENST00000510217 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 OSBPL7Q9BZF2 842 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 ERAP1Q9NZ08 941 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 CYP3A4P08684 503 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 ACTR2P61160 394 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 PPFIA1Q13136 1202 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 GRIK4Q16099 956 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 RASGRP4Q8TDF6 673 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 GLG1Q92896 1179 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
PFDN1-203ENST00000510217 C6orf50Q9HD87 102 aa11.72□□□□□ -0.53
PFDN1-203ENST00000510217 COL4A6Q14031 1691 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 WDR81Q562E7 1941 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-203ENST00000510217 EPOPA6NHQ4 379 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 EFCAB14O75071 495 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 CCNE2O96020 404 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 GNA11P29992 359 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
PFDN1-203ENST00000510217 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 MARCH8Q5T0T0 291 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 PLA2G4DQ86XP0 818 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 CCDC148Q8NFR7 591 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 ZNF274Q96GC6 653 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-203ENST00000510217 C22orf23Q9BZE7 217 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 SMARCAD1Q9H4L7 1026 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 TUBE1Q9UJT0 475 aa11.71□□□□□ -0.53
PFDN1-203ENST00000510217 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 DDX39AO00148 427 aaKnown RBP11.7□□□□□ -0.54
PFDN1-203ENST00000510217 DHX15O43143 795 aaKnown RBP11.7□□□□□ -0.54
PFDN1-203ENST00000510217 TLL1O43897 1013 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 ATG7O95352 703 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 GJB5O95377 273 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 ZNF76P36508 570 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
PFDN1-203ENST00000510217 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
PFDN1-203ENST00000510217 TAP1Q03518 808 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 MGAT3Q09327 533 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 STK3Q13188 491 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 IKBKEQ14164 716 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 PLCB4Q15147 1175 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 FAM26DQ5JW98 314 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 MCTP2Q6DN12 878 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.7□□□□□ -0.54
PFDN1-203ENST00000510217 RPAINQ86UA6 219 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 LENG9Q96B70 501 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 AZI2Q9H6S1 392 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
PFDN1-203ENST00000510217 REV3LO60673 3130 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
PFDN1-203ENST00000510217 EDIL3O43854 480 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 CHRNA1P02708 482 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 INSRRP14616 1297 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 CIITAP33076 1130 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 IGBP1P78318 339 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 SSRP1Q08945 709 aaKnown RBP11.69□□□□□ -0.54
PFDN1-203ENST00000510217 SCRN1Q12765 414 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 NPY5RQ15761 445 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 ABHD15Q6UXT9 468 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 PLPPR4Q7Z2D5 763 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-203ENST00000510217 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 TRAPPC12Q8WVT3 735 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 IL17RAQ96F46 866 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 CERS4Q9HA82 394 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
PFDN1-203ENST00000510217 NLRC5Q86WI3 1866 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 TRANK1O15050 2925 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-203ENST00000510217 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 M0R2N6 131 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 RFXAPO00287 272 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 CPLX1O14810 134 aa11.68□□□□□ -0.54
PFDN1-203ENST00000510217 DEXIO95424 95 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms