RNA–Protein interactions for RNA: ENST00000509642.5

PPARGC1A-208, Transcript of PPARG coactivator 1 alpha, human

TSL 2

Gene PPARGC1A, Length 1,391 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPARGC1A-208	ENST00000509642	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PCDHGB3	Q9Y5G1	929 aa		4.62	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CACNA1S	Q13698	1873 aa		4.62	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PNPLA7	Q6ZV29	1317 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CNTNAP4	Q9C0A0	1308 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ABCC12	Q96J65	1359 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ERVV-1	B6SEH8	477 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SNAP23	O00161	211 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CPNE3	O75131	537 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	RPS6KA4	O75676	772 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	GJB6	O95452	261 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	NTSR2	O95665	410 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CSF1R	P07333	972 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	IDE	P14735	1019 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	GLUL	P15104	373 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ATP4A	P20648	1035 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ADH6	P28332	368 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ADORA1	P30542	326 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	KIF5B	P33176	963 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZNF132	P52740	706 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	EIF6	P56537	245 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PLIN5	Q00G26	463 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TNP2	Q05952	138 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SMC1A	Q14683	1233 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CBX2	Q14781	532 aa	Predicted RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ARHGAP29	Q52LW3	1261 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	FAAH2	Q6GMR7	532 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	IQCE	Q6IPM2	695 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SWSAP1	Q6NVH7	229 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	LHFPL2	Q6ZUX7	228 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CHSY3	Q70JA7	882 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	OTOP3	Q7RTS5	596 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	STRA8	Q7Z7C7	330 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MYLK4	Q86YV6	388 aa	Predicted RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	FAM186B	Q8IYM0	893 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	NKAIN3	Q8N8D7	197 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ACRBP	Q8NEB7	543 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TTLL11	Q8NHH1	800 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	LEO1	Q8WVC0	666 aa	Predicted RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZFPM2	Q8WW38	1151 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SLC7A3	Q8WY07	619 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	RILPL2	Q969X0	211 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CLIP3	Q96DZ5	547 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	VMP1	Q96GC9	406 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PPM1M	Q96MI6	270 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TBC1D32	Q96NH3	1257 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MAP3K14	Q99558	947 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	NOC4L	Q9BVI4	516 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PLA2G12B	Q9BX93	195 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MTFR1L	Q9H019	292 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	KLHL11	Q9NVR0	708 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZNF358	Q9NW07	568 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	UBP1	Q9NZI7	540 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZMYM5	Q9UJ78	669 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	DBNL	Q9UJU6	430 aa	Known RBP	4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TTLL3	Q9Y4R7	772 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	IKBKG	Q9Y6K9	419 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	FPGT-TNNI3K	V9GXZ4	949 aa		4.61	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	RIC1	Q4ADV7	1423 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CDHR2	Q9BYE9	1310 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	USP42	Q9H9J4	1324 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	WTIP	A6NIX2	430 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642		B2RBV5	119 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	EYA2	O00167	538 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TOR1B	O14657	336 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZBTB39	O15060	712 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	INMT	O95050	263 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PDGFA	P04085	211 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	IFIT1	P09914	478 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MAPT	P10636	758 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	NAT2	P11245	290 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	PCSK2	P16519	638 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CHRNA4	P43681	627 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	GTF2A2	P52657	109 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CTSW	P56202	376 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TIMM10	P62072	90 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TMPRSS15	P98073	1019 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ADCY1	Q08828	1119 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	GRM1	Q13255	1194 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	GBX1	Q14549	363 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	MTFR1	Q15390	333 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	COX20	Q5RI15	118 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	RNF219	Q5W0B1	726 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	LDHAL6A	Q6ZMR3	332 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SPATS2	Q86XZ4	545 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	COL23A1	Q86Y22	540 aa	Predicted RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	ERC1	Q8IUD2	1116 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	SPATA5	Q8NB90	893 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	CENPT	Q96BT3	561 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	TMEM74	Q96NL1	305 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	IPO9	Q96P70	1041 aa	Known RBP	4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	KIF2C	Q99661	725 aa		4.6	□□□□□ -1.67
PPARGC1A-208	ENST00000509642	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms