RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MTMR10Q9NXD2 777 aa18.31■□□□□ 0.52
PDLIM5-212ENST00000509333 JAK2O60674 1132 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 MARK3P27448 753 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 THPOP40225 353 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 KRT25Q7Z3Z0 450 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 FTOQ9C0B1 505 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
PDLIM5-212ENST00000509333 KAT6AQ92794 2004 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 ATP4AP20648 1035 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 PPFIA1Q13136 1202 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 NONOQ15233 471 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 GRIK4Q16099 956 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 INF2Q27J81 1249 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 MOXD1Q6UVY6 613 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RIT2Q99578 217 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
PDLIM5-212ENST00000509333 RRN3P2A6NIE6 340 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 TDP2O95551 362 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 SLC26A2P50443 739 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 TCTN1Q2MV58 587 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 EARS2Q5JPH6 523 aaKnown RBP18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 FAM26DQ5JW98 314 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 MIS18BP1Q6P0N0 1132 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 GJA10Q969M2 543 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 LLPHQ9BRT6 129 aaKnown RBP18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 OSBPL7Q9BZF2 842 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 SCN5AQ14524 2016 aa18.28■□□□□ 0.52
PDLIM5-212ENST00000509333 CCDC194A0A1B0GVG4 234 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 POTEB3A0JP26 581 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 PSMD10O75832 226 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 ACTN1P12814 892 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 PBX2P40425 430 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 KRT76Q01546 638 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 POTEBQ6S5H4 581 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 CCDC60Q8IWA6 550 aaPredicted RBP18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 PBX4Q9BYU1 374 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 ZNF302Q9NR11 478 aa18.27■□□□□ 0.52
PDLIM5-212ENST00000509333 BACH1O14867 736 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 HBP1O60381 514 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 CAND2O75155 1236 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 CHRNA1P02708 482 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 NR5A1Q13285 461 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 RABEP1Q15276 862 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 FAM160B1Q5W0V3 765 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 KRT40Q6A162 431 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 PPP4R3AQ6IN85 833 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 TAF2Q6P1X5 1199 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 B3GNT9Q6UX72 402 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 IL27Q8NEV9 243 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 PHOSPHO2Q8TCD6 241 aa18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
PDLIM5-212ENST00000509333 ZBBXA8MT70 800 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 PSAPP07602 524 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 IGBP1P78318 339 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 LETM2Q2VYF4 491 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 ZNF697Q5TEC3 545 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 DBF4BQ8NFT6 615 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 ATP8B4Q8TF62 1192 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 TRAPPC12Q8WVT3 735 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 TUBE1Q9UJT0 475 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 TRPC6Q9Y210 931 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
PDLIM5-212ENST00000509333 ABHD14A-ACY1A0A1B0GW23 586 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 FAM205CA6NFA0 338 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 GAS7O60861 476 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 MMP1P03956 469 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 DNAJB2P25686 324 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 KLRC1P26715 233 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 KRT2P35908 639 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 PLEKHG4Q58EX7 1191 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 ZNF484Q5JVG2 852 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms