RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 PDE2AO00408 941 aaPredicted RBP12.34□□□□□ -0.43
COPS4-206ENST00000509093 KRT86O43790 486 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 SLC37A4O43826 429 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 PTPRAP18433 802 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 SCP2P22307 547 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
COPS4-206ENST00000509093 EPHB4P54760 987 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 TTC19Q6DKK2 380 aaPredicted RBP12.34□□□□□ -0.43
COPS4-206ENST00000509093 EMBQ6PCB8 327 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
COPS4-206ENST00000509093 TBC1D5Q92609 795 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 KLRG1Q96E93 195 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 KIAA1683Q9H0B3 1180 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 GGA2Q9UJY4 613 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
COPS4-206ENST00000509093 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 HSF2BPO75031 334 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 RASSF9O75901 435 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 KRT83P78385 493 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
COPS4-206ENST00000509093 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 DPYDQ12882 1025 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 DRP2Q13474 957 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 N4BP2L2Q92802 583 aaPredicted RBP12.33□□□□□ -0.44
COPS4-206ENST00000509093 DNAJC7Q99615 494 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
COPS4-206ENST00000509093 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
COPS4-206ENST00000509093 USP2O75604 605 aaPredicted RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 ARL6IP4Q66PJ3 421 aaKnown RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 KDM7AQ6ZMT4 941 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 CAVIN3Q969G5 261 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 GJA10Q969M2 543 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 ARL8AQ96BM9 186 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 EPN3Q9H201 632 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 TNFRSF8P28908 595 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 AFMP43652 599 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 KIAA1328Q86T90 577 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 SMYD4Q8IYR2 804 aaPredicted RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
COPS4-206ENST00000509093 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 VPS16Q9H269 839 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 TAB2Q9NYJ8 693 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
COPS4-206ENST00000509093 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 PPP1R12AO14974 1030 aaPredicted RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 OR52Z1P0C646 297 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 VCAM1P19320 739 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 CASP1P29466 404 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 LSP1P33241 339 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 APBA1Q02410 837 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 NNTQ13423 1086 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 CEP85LQ5SZL2 805 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 EMC10Q5UCC4 262 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 FAM160B2Q86V87 743 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 PICK1Q9NRD5 415 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 GINM1Q9NU53 330 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 RWDD2AQ9UIY3 292 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 PITPNM2Q9BZ72 1349 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 KCNJ18B7U540 433 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 ZNF185O15231 689 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 PLA2G6O60733 806 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 CLSTN1O94985 981 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 IDEP14735 1019 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 KCNJ12Q14500 433 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 TCP11X2Q5H9J9 407 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 CCDC13Q8IYE1 715 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 ZNF280CQ8ND82 737 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.31□□□□□ -0.44
COPS4-206ENST00000509093 ZNF473Q8WTR7 871 aaKnown RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 AGBL1Q96MI9 1066 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
COPS4-206ENST00000509093 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
COPS4-206ENST00000509093 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
COPS4-206ENST00000509093 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
COPS4-206ENST00000509093 ERCC3P19447 782 aa12.3□□□□□ -0.44
COPS4-206ENST00000509093 EPHX2P34913 555 aa12.3□□□□□ -0.44
COPS4-206ENST00000509093 CYLC1P35663 651 aaPredicted RBP12.3□□□□□ -0.44
COPS4-206ENST00000509093 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms