RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CBX3Q13185 183 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 MEI1Q5TIA1 1274 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 FITM2Q8N6M3 262 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 STKLD1Q8NE28 680 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 STAMQ92783 540 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 FERMT2Q96AC1 680 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TUBGCP2Q9BSJ2 902 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC28BQ9BUN5 200 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 SPATA16Q9BXB7 569 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 ETNK1Q9HBU6 452 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 NMRK1Q9NWW6 199 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TUBGCP4Q9UGJ1 667 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 SIGLEC16A6NMB1 481 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 FOXP2O15409 715 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ZPR1O75312 459 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 RPN1P04843 607 aaKnown RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 VHLP40337 213 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 SLC4A8Q2Y0W8 1093 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ADSSL1Q8N142 457 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ANKRD13CQ8N6S4 541 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ERGIC2Q96RQ1 377 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 PPP1R12CQ9BZL4 782 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 LRMDAQ9H2I8 198 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 GDAQ9Y2T3 454 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 TRIM75PA6NK02 468 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ATP9AO75110 1047 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 PALMO75781 387 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ATP5HO75947 161 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 FGAP02671 866 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 NUDT17P0C025 328 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 YY1P25490 414 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 CCNJLQ8IV13 435 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 SCFD2Q8WU76 684 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 GATA6Q92908 595 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 PYM1Q9BRP8 204 aaKnown RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 DDX23Q9BUQ8 820 aaKnown RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 TXLNGYQ9BZA5 131 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 STOML1Q9UBI4 398 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 ABCF2Q9UG63 623 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 PRKAG3Q9UGI9 489 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 RPL26L1Q9UNX3 145 aaKnown RBP10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
PDGFRA-207ENST00000509092 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 UBE2Q2LH0YL09 131 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 FTCDO95954 541 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 AGTP01019 485 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 GM2AP17900 193 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 RFX5P48382 616 aaPredicted RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 IFNAR2P48551 515 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 OCRLQ01968 901 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 EXOC3L1Q86VI1 746 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 OSBP2Q969R2 916 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 TMEM237Q96Q45 408 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 MIS12Q9H081 205 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PCDH18Q9HCL0 1135 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 SPATA7Q9P0W8 599 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 LARSQ9P2J5 1176 aaKnown RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PAIP2BQ9ULR5 123 aaKnown RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 ZNF213O14771 459 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 HNRNPRO43390 633 aaKnown RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 CEP104O60308 925 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 GNA14O95837 355 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 DNA2P51530 1060 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PHEXP78562 749 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PTPN12Q05209 780 aaKnown RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 NR5A1Q13285 461 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 CNGA2Q16280 664 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 COL23A1Q86Y22 540 aaPredicted RBP10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 SUPT20HQ8NEM7 779 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 SEC14L1Q92503 715 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 HIC2Q96JB3 615 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 FGFR1OP2Q9NVK5 253 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
PDGFRA-207ENST00000509092 PLEKHG3A1L390 1219 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 RGS16O15492 202 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 DAPK3O43293 454 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ECE2O60344 883 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 BMP15O95972 392 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 AFPP02771 609 aaKnown RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ZFXP17010 805 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 SULT2A1Q06520 285 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms