RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 BANK1Q8NDB2 785 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 LENG1Q96BZ8 264 aaPredicted RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 DHX58Q96C10 678 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 LXNQ9BS40 222 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 HOOK1Q9UJC3 728 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 Q9Y3F1 56 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 IGHA2P01877 340 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 MYL3P08590 195 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 PLCG1P19174 1290 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 CHMP4BP1P59074 171 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 PSMC5P62195 406 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 GPR20Q99678 358 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 SMARCAD1Q9H4L7 1026 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 DDX19AQ9NUU7 478 aaKnown RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 ZNF215Q9UL58 517 aaPredicted RBP12.34□□□□□ -0.43
BRCC3P1-201ENST00000508559 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 GSTTP1A0A1W2PQM5 241 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 MED24O75448 989 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 ZNF202O95125 648 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 LIG1P18858 919 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 MUTP22033 750 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 PTGS1P23219 599 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 STAT5BP51692 787 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 DHX8Q14562 1220 aaKnown RBP12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 GNASQ5JWF2 1037 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 KANK3Q6NY19 840 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 B3GNT9Q6UX72 402 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 RNF180Q86T96 592 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 CATSPER3Q86XQ3 398 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 NRBP2Q9NSY0 501 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 DACT1Q9NYF0 836 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 STK17AQ9UEE5 414 aa12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
BRCC3P1-201ENST00000508559 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 ADCY6O43306 1168 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 KPNA6O60684 536 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 NR1I2O75469 434 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 SLITRK3O94933 977 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 ATG7O95352 703 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 PGK1P00558 417 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 KRT18P05783 430 aaKnown RBP12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 MMP3P08254 477 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 CCL5P13501 91 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 MARK3P27448 753 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 BEX3Q00994 111 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 AMPD3Q01432 767 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 PRKCEQ02156 737 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 GRB10Q13322 594 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 SV2BQ7L1I2 683 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 CCDC60Q8IWA6 550 aaPredicted RBP12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 FAM167AQ96KS9 214 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 LRRC27Q9C0I9 530 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 SERTAD1Q9UHV2 236 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 TRPC6Q9Y210 931 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 HPSEQ9Y251 543 aa12.32□□□□□ -0.44
BRCC3P1-201ENST00000508559 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms