RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
SKP2-204ENST00000508514 APBB2Q92870 758 aa20.5■□□□□ 0.87
SKP2-204ENST00000508514 YME1L1Q96TA2 773 aa20.5■□□□□ 0.87
SKP2-204ENST00000508514 AGO3Q9H9G7 860 aaKnown RBP20.5■□□□□ 0.87
SKP2-204ENST00000508514 JPH1Q9HDC5 661 aaPredicted RBP20.5■□□□□ 0.87
SKP2-204ENST00000508514 TUBE1Q9UJT0 475 aa20.5■□□□□ 0.87
SKP2-204ENST00000508514 MEIS1O00470 390 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 ENPP3O14638 875 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 IGBP1P78318 339 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 FBXO47Q5MNV8 452 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 KHSRPQ92945 711 aaKnown RBP eCLIP20.49■□□□□ 0.873e-6■■□□□ 12.7
SKP2-204ENST00000508514 KCNB2Q92953 911 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 RC3H2Q9HBD1 1191 aaKnown RBP20.49■□□□□ 0.87
SKP2-204ENST00000508514 AGO4Q9HCK5 861 aaKnown RBP20.49■□□□□ 0.87
SKP2-204ENST00000508514 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 SLC9A2Q9UBY0 812 aa20.49■□□□□ 0.87
SKP2-204ENST00000508514 KLF18A0A0U1RQI7 1052 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 SMCO2A6NFE2 343 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 H3BNC9 293 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 ATG7O95352 703 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 COL9A1P20849 921 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 ADD1P35611 737 aaKnown RBP20.48■□□□□ 0.87
SKP2-204ENST00000508514 ACTR2P61160 394 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 PLCB4Q15147 1175 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 CEP55Q53EZ4 464 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 RTN4RL1Q86UN2 441 aaPredicted RBP20.48■□□□□ 0.87
SKP2-204ENST00000508514 TMEM192Q8IY95 271 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 TRAPPC12Q8WVT3 735 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 LINC01599Q8WXQ3 324 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 MRPL38Q96DV4 380 aaKnown RBP20.48■□□□□ 0.87
SKP2-204ENST00000508514 ANO3Q9BYT9 981 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 CD320Q9NPF0 282 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 CDY2AQ9Y6F7 541 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 NFASCO94856 1347 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 COL4A6Q14031 1691 aa20.48■□□□□ 0.87
SKP2-204ENST00000508514 CCNE2O96020 404 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 SREBF1P36956 1147 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 ADCY7P51828 1080 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 PPP1R18Q6NYC8 613 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 CRYGNQ8WXF5 182 aa20.47■□□□□ 0.87
SKP2-204ENST00000508514 UBE2ZQ9H832 354 aaPredicted RBP20.47■□□□□ 0.87
SKP2-204ENST00000508514 KAT6AQ92794 2004 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 IGKV6D-21A0A0A0MT36 114 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 GOLGA8AA7E2F4 631 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 GOLGA8BA8MQT2 603 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 FAM86B1E9PN63 330 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 CDC45O75419 566 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 FOSP01100 380 aaPredicted RBP20.46■□□□□ 0.87
SKP2-204ENST00000508514 FAM86B2P0C5J1 330 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
SKP2-204ENST00000508514 GPM6BQ13491 265 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.46■□□□□ 0.87
SKP2-204ENST00000508514 IL17RAQ96F46 866 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 SAMD11Q96NU1 681 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
SKP2-204ENST00000508514 EPHX3Q9H6B9 360 aa20.46■□□□□ 0.87
SKP2-204ENST00000508514 RRN3P2A6NIE6 340 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 DHX15O43143 795 aaKnown RBP20.45■□□□□ 0.86
SKP2-204ENST00000508514 CD52P31358 61 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 STAT5BP51692 787 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 TMEM62Q0P6H9 643 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 APOBRQ0VD83 1088 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 TEX2Q8IWB9 1127 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 ZNF689Q96CS4 500 aaPredicted RBP20.45■□□□□ 0.86
SKP2-204ENST00000508514 PCDHA2Q9Y5H9 948 aa20.45■□□□□ 0.86
SKP2-204ENST00000508514 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 KCNA5P22460 613 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 RCAN1P53805 252 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 KRT32Q14532 448 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 PKN1Q16512 942 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 PFKFB3Q16875 520 aaPredicted RBP20.44■□□□□ 0.86
SKP2-204ENST00000508514 LEXMQ3ZCV2 418 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 ABHD15Q6UXT9 468 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 TSHZ1Q6ZSZ6 1077 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 UIMC1Q96RL1 719 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 SDF4Q9BRK5 362 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 AZI2Q9H6S1 392 aa20.44■□□□□ 0.86
SKP2-204ENST00000508514 C5orf67F2Z3F1 127 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 hCG_1984214I3L0E3 225 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 ATP4AP20648 1035 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 AP3B2Q13367 1082 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 COL19A1Q14993 1142 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 TCEAL5Q5H9L2 206 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 Q6ZUG5 572 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 FIBCD1Q8N539 461 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 ZNF713Q8N859 430 aaPredicted RBP20.43■□□□□ 0.86
SKP2-204ENST00000508514 BANK1Q8NDB2 785 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 TRPC6Q9Y210 931 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
SKP2-204ENST00000508514 POTEB3A0JP26 581 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 ZBTB42B2RXF5 422 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
SKP2-204ENST00000508514 GRM6O15303 877 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 EDIL3O43854 480 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 DGKIO75912 1065 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 CYP3A4P08684 503 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms