RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
TRIO-211ENST00000508343 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 WNT8BQ93098 351 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 RIT2Q99578 217 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
TRIO-211ENST00000508343 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
TRIO-211ENST00000508343 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.05■□□□□ 0.32
TRIO-211ENST00000508343 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.05■□□□□ 0.32
TRIO-211ENST00000508343 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 BACH1O14867 736 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 TDP2O95551 362 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 MMP1P03956 469 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 THPOP40225 353 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 GRIK4Q16099 956 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 LETM2Q2VYF4 491 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 ZNF618Q5T7W0 954 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 FAM160B1Q5W0V3 765 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 KRT40Q6A162 431 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRIO-211ENST00000508343 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
TRIO-211ENST00000508343 ACTN1P12814 892 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 INSRRP14616 1297 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
TRIO-211ENST00000508343 NR5A1Q13285 461 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 GPNMBQ14956 572 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 PPP4R3AQ6IN85 833 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 TRAF7Q6Q0C0 670 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
TRIO-211ENST00000508343 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
TRIO-211ENST00000508343 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
TRIO-211ENST00000508343 KAT6AQ92794 2004 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 WDR64B1ANS9 1081 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 RSPH10B2B2RC85 870 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 GAS7O60861 476 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 CAND2O75155 1236 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 PSAPP07602 524 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 RSPH10BP0C881 870 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
TRIO-211ENST00000508343 FOSBP53539 338 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
TRIO-211ENST00000508343 MARCH8Q5T0T0 291 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 TAF2Q6P1X5 1199 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
TRIO-211ENST00000508343 TNFRSF25Q93038 417 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 NAP1L4Q99733 375 aaKnown RBP17.03■□□□□ 0.32
TRIO-211ENST00000508343 TEKT3Q9BXF9 490 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
TRIO-211ENST00000508343 MBLAC1A4D2B0 266 aaPredicted RBP17.02■□□□□ 0.32
TRIO-211ENST00000508343 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 HBP1O60381 514 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 CCNT1O60563 726 aaKnown RBP17.02■□□□□ 0.32
TRIO-211ENST00000508343 NBNO60934 754 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 PSMD10O75832 226 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 CXCL10P02778 98 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 IGBP1P78318 339 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 FAM109BQ6ICB4 259 aaPredicted RBP17.02■□□□□ 0.32
TRIO-211ENST00000508343 RPAINQ86UA6 219 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 DIS3L2Q8IYB7 885 aaKnown RBP17.02■□□□□ 0.32
TRIO-211ENST00000508343 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 ATP8B4Q8TF62 1192 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 GJA10Q969M2 543 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 DISC1Q9NRI5 854 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 MAFBQ9Y5Q3 323 aaPredicted RBP17.02■□□□□ 0.32
TRIO-211ENST00000508343 SLC4A7Q9Y6M7 1214 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 SCN5AQ14524 2016 aa17.02■□□□□ 0.32
TRIO-211ENST00000508343 ZBBXA8MT70 800 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 SLC37A4O43826 429 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 ATP4AP20648 1035 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 SFNP31947 248 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 MCM2P49736 904 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 JAK3P52333 1124 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRIO-211ENST00000508343 RUFY4Q6ZNE9 571 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 RSPH3Q86UC2 560 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 UNC45AQ9H3U1 944 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 GABBR1Q9UBS5 961 aa17.01■□□□□ 0.31
TRIO-211ENST00000508343 FAM205CA6NFA0 338 aa17■□□□□ 0.31
TRIO-211ENST00000508343 GUCY1B3Q02153 619 aa17■□□□□ 0.31
TRIO-211ENST00000508343 MBTPS1Q14703 1052 aa17■□□□□ 0.31
TRIO-211ENST00000508343 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
TRIO-211ENST00000508343 FAM26DQ5JW98 314 aa17■□□□□ 0.31
TRIO-211ENST00000508343 CNKSR3Q6P9H4 555 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms