RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ADAMTS19Q8TE59 1207 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 GLG1Q92896 1179 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 PCYT2Q99447 389 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 MXRA8Q9BRK3 442 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 IFIH1Q9BYX4 1025 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 SUGCTQ9HAC7 445 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 SLC9A2Q9UBY0 812 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 NFASCO94856 1347 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 ARP10275 920 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 SREBF1P36956 1147 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 METAP2P50579 478 aaKnown RBP eCLIP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 MGAT3Q09327 533 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 SKIV2LQ15477 1246 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 PFKFB3Q16875 520 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 CEP55Q53EZ4 464 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 APBB2Q92870 758 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 TOP1MTQ969P6 601 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 SMARCAD1Q9H4L7 1026 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 AGO4Q9HCK5 861 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 TMEM260Q9NX78 707 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 RALGAPA2Q2PPJ7 1873 aa14.86□□□□□ -0.03
HMGCS1-205ENST00000508319 TNFRSF10AO00220 468 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 KCNQ1P51787 676 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 ACTR2P61160 394 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 FGD1P98174 961 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 Q6ZUG5 572 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 FBXL16Q8N461 479 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 CRYGNQ8WXF5 182 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 BRF1Q92994 677 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 ZBTB10Q96DT7 871 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 UHRF1Q96T88 793 aaPredicted RBP14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 C17orf80Q9BSJ5 609 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 AGXT2Q9BYV1 514 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 GLT8D2Q9H1C3 349 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 LMCD1Q9NZU5 365 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 LOXHD1Q8IVV2 1947 aa14.85□□□□□ -0.03
HMGCS1-205ENST00000508319 TTC3P53804 2025 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 ESYT2A0FGR8 921 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 MEIS1O00470 390 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 GHRP10912 638 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 BMP1P13497 986 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 SCG2P13521 617 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 INSRRP14616 1297 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 LPIN1Q14693 890 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 ATG2AQ2TAZ0 1938 aa14.84□□□□□ -0.03
HMGCS1-205ENST00000508319 IGLV3-22A0A075B6J6 115 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 CCDC196A0A1B0GTZ2 297 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 FAM86B1E9PN63 330 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 ADAMTS3O15072 1205 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 UPP2O95045 317 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 CCNE2O96020 404 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 FAM86B2P0C5J1 330 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 RPS6KB1P23443 525 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 IGBP1P78318 339 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 PKN1Q16512 942 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 AAK1Q2M2I8 961 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 FBXO47Q5MNV8 452 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 JAKMIP3Q5VZ66 844 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 NIPA1Q7RTP0 329 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 PLPPR4Q7Z2D5 763 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 RSPH3Q86UC2 560 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 IL27Q8NEV9 243 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 NECAB3Q96P71 396 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 YME1L1Q96TA2 773 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 ZMYND12Q9H0C1 365 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 COG5Q9UP83 839 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 TRPC6Q9Y210 931 aa14.83□□□□□ -0.04
HMGCS1-205ENST00000508319 IGKV6D-21A0A0A0MT36 114 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 RRN3P2A6NIE6 340 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 ATG7O95352 703 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 CYP3A4P08684 503 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 MRPS6P82932 125 aaKnown RBP14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 TRAPPC12Q8WVT3 735 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 FAM49AQ9H0Q0 323 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 CDY2AQ9Y6F7 541 aa14.82□□□□□ -0.04
HMGCS1-205ENST00000508319 MYO7AQ13402 2215 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 DDX39AO00148 427 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 PRPF3O43395 683 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 REC8O95072 547 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 RPLP2P05387 115 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 ZNF76P36508 570 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms