RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ZFP69BQ9UJL9 534 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 ADAMTS20P59510 1910 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 PRICKLE3O43900 615 aaPredicted RBP7.49□□□□□ -1.21
DHFR-204ENST00000508282 NPTXRO95502 500 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 GLRBP48167 497 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 TMEM177Q53S58 311 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 LCE1DQ5T752 114 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 ARHGAP20Q9P2F6 1191 aa7.49□□□□□ -1.21
DHFR-204ENST00000508282 TNPO3Q9Y5L0 923 aaKnown RBP7.49□□□□□ -1.21
DHFR-204ENST00000508282 SCDO00767 359 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 IL18BPO95998 194 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 SDSP20132 328 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 IGFALSP35858 605 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 ZNF460Q14592 562 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 ZCCHC8Q6NZY4 707 aaKnown RBP7.48□□□□□ -1.21
DHFR-204ENST00000508282 TRMT10BQ6PF06 316 aaKnown RBP7.48□□□□□ -1.21
DHFR-204ENST00000508282 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 IGDCC4Q8TDY8 1250 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 RELTQ969Z4 430 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 KCND1Q9NSA2 647 aa7.48□□□□□ -1.21
DHFR-204ENST00000508282 PRAMEF25A6NGN4 478 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 MROH6A6NGR9 719 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 RFPL3O75679 317 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 KNG1P01042 644 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 CYP1A1P04798 512 aaPredicted RBP7.47□□□□□ -1.21
DHFR-204ENST00000508282 CNR2P34972 360 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
DHFR-204ENST00000508282 SMAD2Q15796 467 aaKnown RBP7.47□□□□□ -1.21
DHFR-204ENST00000508282 ZFYVE27Q5T4F4 411 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 CXorf38Q8TB03 319 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 MBD6Q96DN6 1003 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 LCORQ96JN0 433 aaPredicted RBP7.47□□□□□ -1.21
DHFR-204ENST00000508282 TMEM168Q9H0V1 697 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 FTSJ1Q9UET6 329 aa7.47□□□□□ -1.21
DHFR-204ENST00000508282 MRPL42Q9Y6G3 142 aaKnown RBP7.47□□□□□ -1.21
DHFR-204ENST00000508282 SLC12A8A0AV02 714 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 C9orf118A6NHY6 69 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 B4E1Z4 1266 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 OPA1O60313 960 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 FOXD2O60548 495 aaPredicted RBP7.46□□□□□ -1.22
DHFR-204ENST00000508282 GLRX3O76003 335 aaKnown RBP7.46□□□□□ -1.22
DHFR-204ENST00000508282 ASLP04424 464 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 CHGBP05060 677 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 MECP2P51608 486 aaKnown RBP7.46□□□□□ -1.22
DHFR-204ENST00000508282 HERVK_113P62684 666 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 KIAA2012Q0VF49 1180 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 TKFCQ3LXA3 575 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 DLG3Q92796 817 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 TACO1Q9BSH4 297 aaKnown RBP7.46□□□□□ -1.22
DHFR-204ENST00000508282 BTBD7Q9P203 1132 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 USP35Q9P2H5 1018 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 CD2APQ9Y5K6 639 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
DHFR-204ENST00000508282 M0R2C6 588 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 KLHL18O94889 574 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 FBXO21O94952 628 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 ZBTB48P10074 688 aaPredicted RBP7.45□□□□□ -1.22
DHFR-204ENST00000508282 AOAHP28039 575 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 MC4RP32245 332 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 TCEA2Q15560 299 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 C16orf86Q6ZW13 317 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 OTOP1Q7RTM1 612 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 DDX53Q86TM3 631 aaKnown RBP7.45□□□□□ -1.22
DHFR-204ENST00000508282 SYNPOQ8N3V7 929 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 C2orf69Q8N8R5 385 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 APPBP2Q92624 585 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 KCNH7Q9NS40 1196 aa7.45□□□□□ -1.22
DHFR-204ENST00000508282 RASSF10A6NK89 507 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 MMEP08473 750 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 PTGS1P23219 599 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 PKN3Q6P5Z2 889 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 FAM124AQ86V42 546 aa7.44□□□□□ -1.22
DHFR-204ENST00000508282 TRAF5O00463 557 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 B4GALT3O60512 393 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 MPIG6BO95866 241 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 IRF9Q00978 393 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 BORAQ6PGQ7 559 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 LGI4Q8N135 537 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 ASB15Q8WXK1 588 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 INVSQ9Y283 1065 aa7.43□□□□□ -1.22
DHFR-204ENST00000508282 SYN1P17600 705 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 SDHAP31040 664 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 NFATC3Q12968 1075 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 PIK3R6Q5UE93 754 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 KLHL36Q8N4N3 616 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 CHST14Q8NCH0 376 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 BOCQ9BWV1 1114 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
DHFR-204ENST00000508282 INTS7Q9NVH2 962 aaKnown RBP7.42□□□□□ -1.22
DHFR-204ENST00000508282 UCKL1Q9NWZ5 548 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms