RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PCDHGA8Q9Y5G5 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA7Q9Y5G6 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA6Q9Y5G7 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA3Q9Y5H0 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA2Q9Y5H1 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 MCF2LO15068 1137 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 OPA1O60313 960 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 FGFR1OPO95684 399 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 POLR3DP05423 398 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 NOP2P46087 812 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CLCQ05315 142 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 POSTNQ15063 836 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CCDC122Q5T0U0 273 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 RFX8Q6ZV50 586 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 FGD2Q7Z6J4 655 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 NLRP10Q86W26 655 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 NOSTRINQ8IVI9 506 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CEP97Q8IW35 865 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TTC16Q8NEE8 873 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CCDC114Q96M63 670 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TEX13AQ9BXU3 409 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 UNKQ9C0B0 810 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TRPV5Q9NQA5 729 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 PSD3Q9NYI0 1048 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 AXIN2Q9Y2T1 843 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TRBV23-1A0A0A0MS06 115 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 LACTBL1A8MY62 500 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TMCO5BA8MYB1 307 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 F5H0A9 414 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 AP3B1O00203 1094 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CACNB4O00305 520 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 SUSD5O60279 629 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TSPAN3O60637 253 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 SRGAP2O75044 1071 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 F13A1P00488 732 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CSTBP04080 98 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CYP1A2P05177 515 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TFEBP19484 476 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 ZNF165P49910 485 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 PGM2L1Q6PCE3 622 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 BRAPQ7Z569 592 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CREG2Q8IUH2 290 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 C19orf47Q8N9M1 422 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 ZMIZ2Q8NF64 920 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 CCDC148Q8NFR7 591 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 MOSPD2Q8NHP6 518 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 RRP36Q96EU6 259 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 DDX23Q9BUQ8 820 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 HAUS2Q9NVX0 235 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 VPS28Q9UK41 221 aa8.33□□□□□ -1.08
PDGFRA-206ENST00000508170 KIF27Q86VH2 1401 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 FLT1P17948 1338 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 GNRH1P01148 92 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 PTPREP23469 700 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 ATP5DP30049 168 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 INPP5BP32019 993 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 PIK3CBP42338 1070 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 GBE1Q04446 702 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 ARL13BQ3SXY8 428 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 KCNV1Q6PIU1 500 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 LPCAT2Q7L5N7 544 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 OR8H3Q8N146 312 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 OR2W6PQ8NHA6 318 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 SLC7A14Q8TBB6 771 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 TMEM237Q96Q45 408 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 YME1L1Q96TA2 773 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 DISC1Q9NRI5 854 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 TCP11L1Q9NUJ3 509 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 INTS10Q9NVR2 710 aaKnown RBP8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 ITGB1BP2Q9UKP3 347 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
PDGFRA-206ENST00000508170 OFD1O75665 1012 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 RPIAP49247 311 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 CENPAP49450 140 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 SGCGQ13326 291 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 ADAM15Q13444 863 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 DGKZQ13574 1117 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 PLCL1Q15111 1095 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 PPP1R7Q15435 360 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 MTERF4Q7Z6M4 381 aaKnown RBP8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 LRRTM4Q86VH4 590 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 SIMC1Q8NDZ2 872 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 PPP1R9BQ96SB3 815 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 DMRT3Q9NQL9 472 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 CNPY2Q9Y2B0 182 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 KRBA1A5PL33 1030 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 MYO1BO43795 1136 aa8.31□□□□□ -1.08
PDGFRA-206ENST00000508170 MAN1A2O60476 641 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms