RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KAT6AQ92794 2004 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 IGKV6D-21A0A0A0MT36 114 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 DHX15O43143 795 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 EDIL3O43854 480 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 EFCAB14O75071 495 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 ARHGEF15O94989 841 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 CA3P07451 260 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 GNA11P29992 359 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 CIITAP33076 1130 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 ACTR2P61160 394 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 DEFB103AP81534 67 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 ADGRE1Q14246 886 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 PLEKHG4Q58EX7 1191 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 MARCH8Q5T0T0 291 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 PPP2R2DQ66LE6 453 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 CCDC148Q8NFR7 591 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 GAS2L1Q99501 681 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 SH3GLB2Q9NR46 395 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 SIP14410 1827 aa10.34□□□□□ -0.75
PDLIM5-209ENST00000506632 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 CCNE2O96020 404 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 CTSHP09668 335 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 MARK3P27448 753 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 KCNJ6P48051 423 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 ANAPC15P60006 121 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 AKAP17AQ02040 695 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 TAP1Q03518 808 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 PPFIA1Q13136 1202 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 IKBKEQ14164 716 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 NPY5RQ15761 445 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 GRIK4Q16099 956 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 TAF2Q6P1X5 1199 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 RUFY4Q6ZNE9 571 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 PLPPR4Q7Z2D5 763 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 USP38Q8NB14 1042 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 DBF4BQ8NFT6 615 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 BICD2Q8TD16 824 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 GLG1Q92896 1179 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 LENG9Q96B70 501 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 SDF4Q9BRK5 362 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 VPS54Q9P1Q0 977 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 TUBE1Q9UJT0 475 aa10.33□□□□□ -0.76
PDLIM5-209ENST00000506632 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 RRN3P2A6NIE6 340 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 M0R2N6 131 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 GJB5O95377 273 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 CHRNA1P02708 482 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 INSRRP14616 1297 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 POU3F3P20264 500 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 ZNF76P36508 570 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 SLC26A2P50443 739 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 SSRP1Q08945 709 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 MGAT3Q09327 533 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 ABHD15Q6UXT9 468 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 TMCO2Q7Z6W1 182 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 FAM177A1Q8N128 213 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 AZI2Q9H6S1 392 aa10.32□□□□□ -0.76
PDLIM5-209ENST00000506632 TTC28Q96AY4 2481 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 LCHNA4D1U4 455 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 EPOPA6NHQ4 379 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 TLL1O43897 1013 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 DEXIO95424 95 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 RPLP2P05387 115 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 STAT5BP51692 787 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 SCRN1Q12765 414 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 SPRED2Q7Z698 418 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 CCDC60Q8IWA6 550 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 TRIM22Q8IYM9 498 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 SEPT8Q92599 483 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 RAD9AQ99638 391 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 TBC1D22BQ9NU19 505 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 COL4A6Q14031 1691 aa10.31□□□□□ -0.76
PDLIM5-209ENST00000506632 PRRC2BQ5JSZ5 2229 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 CPLX1O14810 134 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 PFKFB2O60825 505 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 CENPBP07199 599 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 ATP4AP20648 1035 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 USP11P51784 963 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 NLRP5P59047 1200 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 HTRA4P83105 476 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 STK3Q13188 491 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 LPIN1Q14693 890 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 PRR16Q569H4 304 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms