RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
MED28-204ENST00000506409 KIF2CQ99661 725 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 TUBE1Q9UJT0 475 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 LIMCH1Q9UPQ0 1083 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 TRPC6Q9Y210 931 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 KAT6AQ92794 2004 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 TMEM265A0A087WTH1 108 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 CCDC194A0A1B0GVG4 234 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 RSPH10B2B2RC85 870 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 CXCL10P02778 98 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 RSPH10BP0C881 870 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
MED28-204ENST00000506409 SLC26A2P50443 739 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 KRT76Q01546 638 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 FAM160B1Q5W0V3 765 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
MED28-204ENST00000506409 ABHD15Q6UXT9 468 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 TET1Q8NFU7 2136 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 TIFAQ96CG3 184 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 PBX4Q9BYU1 374 aa17.61■□□□□ 0.41
MED28-204ENST00000506409 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 MSH4O15457 936 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 JAK2O60674 1132 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 BAIAP3O94812 1187 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 TDP2O95551 362 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 CTSHP09668 335 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 INSRRP14616 1297 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 ATP2A2P16615 1042 aaKnown RBP17.6■□□□□ 0.41
MED28-204ENST00000506409 PBX2P40425 430 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 IGBP1P78318 339 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 MBTPS1Q14703 1052 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 RAB30Q15771 203 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 INF2Q27J81 1249 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 Q4G0T1 1027 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 TAF2Q6P1X5 1199 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 CNKSR3Q6P9H4 555 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 CCDC60Q8IWA6 550 aaPredicted RBP17.6■□□□□ 0.41
MED28-204ENST00000506409 SMAP1Q8IYB5 467 aaPredicted RBP17.6■□□□□ 0.41
MED28-204ENST00000506409 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
MED28-204ENST00000506409 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
MED28-204ENST00000506409 ZNF302Q9NR11 478 aa17.6■□□□□ 0.41
MED28-204ENST00000506409 CYP3A7-CYP3A51PA0A087WV96 503 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 POTEB3A0JP26 581 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 MBLAC1A4D2B0 266 aaPredicted RBP17.59■□□□□ 0.41
MED28-204ENST00000506409 CYP3A7P24462 503 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 ST3GAL1Q11201 340 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 MARCH8Q5T0T0 291 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 SWSAP1Q6NVH7 229 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 PDXDC2PQ6P474 469 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 MOXD1Q6UVY6 613 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 OXER1Q8TDS5 423 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 SLC5A5Q92911 643 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 GUCD1Q96NT3 240 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 RIT2Q99578 217 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 BRMS1Q9HCU9 246 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 MSRAQ9UJ68 235 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 SAMM50Q9Y512 469 aa17.59■□□□□ 0.41
MED28-204ENST00000506409 GAS7O60861 476 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 PSAPP07602 524 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 KRT2P35908 639 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 KCNJ6P48051 423 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 TRIM29Q14134 588 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 LRCH2Q5VUJ6 765 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 PIK3AP1Q6ZUJ8 805 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 ATP8B4Q8TF62 1192 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.4
MED28-204ENST00000506409 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 DDX25Q9UHL0 483 aaKnown RBP17.58■□□□□ 0.4
MED28-204ENST00000506409 PCDHA10Q9Y5I2 948 aa17.58■□□□□ 0.4
MED28-204ENST00000506409 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 CHMP2AO43633 222 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 RABGGTBP53611 331 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 RABEP1Q15276 862 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 PHOSPHO2Q8TCD6 241 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 TRAPPC12Q8WVT3 735 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 DNAJB3Q8WWF6 145 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 GJA10Q969M2 543 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 ZBTB10Q96DT7 871 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 MBOAT7Q96N66 472 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
MED28-204ENST00000506409 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
MED28-204ENST00000506409 HBP1O60381 514 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 EFCAB14O75071 495 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 SFNP31947 248 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 FOSBP53539 338 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 NR5A1Q13285 461 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms