RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 EPHB1P54762 984 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 GRM2Q14416 872 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 RTN1Q16799 776 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 AOC3Q16853 763 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 WDR66Q8TBY9 1149 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 CPLX3Q8WVH0 158 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 IFT43Q96FT9 208 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 KCTD15Q96SI1 283 aaPredicted RBP6.7□□□□□ -1.34
SCLT1-207ENST00000506233 C1QTNF2Q9BXJ5 285 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 GLIS2Q9BZE0 524 aaPredicted RBP6.7□□□□□ -1.34
SCLT1-207ENST00000506233 DBNDD1Q9H9R9 158 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 GREM1O60565 184 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 KRT18P05783 430 aaKnown RBP6.7□□□□□ -1.34
SCLT1-207ENST00000506233 E4F1Q66K89 784 aaPredicted RBP6.7□□□□□ -1.34
SCLT1-207ENST00000506233 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
SCLT1-207ENST00000506233 TRIM8Q9BZR9 551 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 PCDHA5Q9Y5H7 936 aa6.7□□□□□ -1.34
SCLT1-207ENST00000506233 ECE2O60344 883 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 FOSP01100 380 aaPredicted RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 MTFR1Q15390 333 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 ZNF772Q68DY9 489 aaPredicted RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 PPP4R4Q6NUP7 873 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 TRIM65Q6PJ69 517 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 MRPS27Q92552 414 aaKnown RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 PAGE5Q96GU1 130 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 TTYH3Q9C0H2 523 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 DDX19AQ9NUU7 478 aaKnown RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 SLC12A7Q9Y666 1083 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 ASTN1O14525 1302 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 OFD1O75665 1012 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 SCG2P13521 617 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 CDC25AP30304 524 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 KCNJ4P48050 445 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 TDO2P48775 406 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 TIFAQ96CG3 184 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 R3HDMLQ9H3Y0 253 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 TELO2Q9Y4R8 837 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 LRRC10BA6NIK2 292 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 SMARCA1P28370 1054 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 IARSP41252 1262 aaKnown RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 PSMA6P60900 246 aaKnown RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 NFKB2Q00653 900 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 CHAF1AQ13111 956 aaPredicted RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 CCDC93Q567U6 631 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 FIZ1Q96SL8 496 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 RSRP1Q9BUV0 290 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 NUP62CLQ9H1M0 184 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 CABP5Q9NP86 173 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 SH3GLB2Q9NR46 395 aa6.69□□□□□ -1.34
SCLT1-207ENST00000506233 WRAP73Q9P2S5 460 aaPredicted RBP6.69□□□□□ -1.34
SCLT1-207ENST00000506233 BACH1O14867 736 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 CAND2O75155 1236 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 HSP90AA1P07900 732 aaKnown RBP6.68□□□□□ -1.34
SCLT1-207ENST00000506233 GHRHRQ02643 423 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 GRIN2CQ14957 1233 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 STRIP1Q5VSL9 837 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ERAP2Q6P179 960 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 CNNM4Q6P4Q7 775 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ZSCAN30Q86W11 494 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 BPHLQ86WA6 291 aaPredicted RBP6.68□□□□□ -1.34
SCLT1-207ENST00000506233 SAMD3Q8N6K7 520 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 FSIP1Q8NA03 581 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 PIBF1Q8WXW3 757 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ESR2Q92731 530 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 SPSB2Q99619 263 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 NT5C1AQ9BXI3 368 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 LATS2Q9NRM7 1088 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 IGLV3-22A0A075B6J6 115 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 RIMBP2O15034 1052 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ZBTB48P10074 688 aaPredicted RBP6.68□□□□□ -1.34
SCLT1-207ENST00000506233 NLRP12P59046 1061 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 NR1I3Q14994 352 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 TCEA2Q15560 299 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ZC3H3Q8IXZ2 948 aaKnown RBP6.68□□□□□ -1.34
SCLT1-207ENST00000506233 GOLM1Q8NBJ4 401 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ETNPPLQ8TBG4 499 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 ZNF507Q8TCN5 953 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 DEFB129Q9H1M3 183 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 FAM53CQ9NYF3 392 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 FRMPD4Q14CM0 1322 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 NRDCO43847 1150 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 COBLO75128 1261 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 POTEIP0CG38 1075 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 POTEJP0CG39 1038 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 PTGS1P23219 599 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 RXRBP28702 533 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 SMTNP53814 917 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 GOLGA8FQ08AF8 430 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 GOLGA8DPQ0D2H9 430 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
SCLT1-207ENST00000506233 AFAP1L2Q8N4X5 818 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 KCNG4Q8TDN1 519 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 SENP7Q9BQF6 1050 aa6.68□□□□□ -1.34
SCLT1-207ENST00000506233 CUTAO60888 179 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 GUCY2FP51841 1108 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 SSRP1Q08945 709 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms