RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 SLC9A2Q9UBY0 812 aa13.97□□□□□ -0.17
SNHG4-202ENST00000505522 V9GY48 417 aaPredicted RBP13.97□□□□□ -0.17
SNHG4-202ENST00000505522 GOLGA8AA7E2F4 631 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 GOLGA8BA8MQT2 603 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 H3BNC9 293 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 ZBTB43O43298 467 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 ARP10275 920 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 CDC27P30260 824 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 GPM6BQ13491 265 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 TSGA10IPQ3SY00 556 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 FBXO47Q5MNV8 452 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
SNHG4-202ENST00000505522 RSPH3Q86UC2 560 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 ANO3Q9BYT9 981 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 TMEM260Q9NX78 707 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 CDY2AQ9Y6F7 541 aa13.96□□□□□ -0.17
SNHG4-202ENST00000505522 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 NFASCO94856 1347 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 SMCO2A6NFE2 343 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 ENPP3O14638 875 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 ADCY7P51828 1080 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 ACTR2P61160 394 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 MRPS6P82932 125 aaKnown RBP13.95□□□□□ -0.18
SNHG4-202ENST00000505522 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
SNHG4-202ENST00000505522 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 CEP55Q53EZ4 464 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 TRAPPC12Q8WVT3 735 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 IL17RAQ96F46 866 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 SDF4Q9BRK5 362 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
SNHG4-202ENST00000505522 AGO4Q9HCK5 861 aaKnown RBP13.95□□□□□ -0.18
SNHG4-202ENST00000505522 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
SNHG4-202ENST00000505522 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 CDC45O75419 566 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 FOSP01100 380 aaPredicted RBP13.94□□□□□ -0.18
SNHG4-202ENST00000505522 KCNA5P22460 613 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 SREBF1P36956 1147 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 CLK2P49760 499 aaKnown RBP13.94□□□□□ -0.18
SNHG4-202ENST00000505522 PTPROQ16827 1216 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 RALGAPA2Q2PPJ7 1873 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 LEXMQ3ZCV2 418 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 TSHZ1Q6ZSZ6 1077 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 FIBCD1Q8N539 461 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 EPHX3Q9H6B9 360 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 AGO3Q9H9G7 860 aaKnown RBP13.94□□□□□ -0.18
SNHG4-202ENST00000505522 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
SNHG4-202ENST00000505522 CD320Q9NPF0 282 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
SNHG4-202ENST00000505522 NCOR1O75376 2440 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 hCG_1984214I3L0E3 225 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 MEIS1O00470 390 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 ATG7O95352 703 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 CCNE2O96020 404 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 CPA1P15085 419 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 CD52P31358 61 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 CTNNB1P35222 781 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 ADD1P35611 737 aaKnown RBP13.93□□□□□ -0.18
SNHG4-202ENST00000505522 STAT5BP51692 787 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 TMEM62Q0P6H9 643 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 KRT32Q14532 448 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 TIGD5Q53EQ6 642 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
SNHG4-202ENST00000505522 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 ZNF713Q8N859 430 aaPredicted RBP13.93□□□□□ -0.18
SNHG4-202ENST00000505522 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
SNHG4-202ENST00000505522 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■□□ 16
SNHG4-202ENST00000505522 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
SNHG4-202ENST00000505522 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
SNHG4-202ENST00000505522 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 FAM86B1E9PN63 330 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 DDX39AO00148 427 aaKnown RBP13.92□□□□□ -0.18
SNHG4-202ENST00000505522 FAM86B2P0C5J1 330 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 ZNF76P36508 570 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 BMPR1AP36894 532 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 RCAN1P53805 252 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 AP3B2Q13367 1082 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 TCEAL5Q5H9L2 206 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 IER5Q5VY09 327 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 ZNF689Q96CS4 500 aaPredicted RBP13.92□□□□□ -0.18
SNHG4-202ENST00000505522 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 TRPV2Q9Y5S1 764 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
SNHG4-202ENST00000505522 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 DHX15O43143 795 aaKnown RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 DGKIO75912 1065 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms