RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FAM217BQ9NTX9 383 aaPredicted RBP22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 MTUS1Q9ULD2 1270 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 MEIS1O00470 390 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 METAP2P50579 478 aaKnown RBP eCLIP22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 TFF2Q03403 129 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 RUFY4Q6ZNE9 571 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 PLPPR4Q7Z2D5 763 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 FBXL16Q8N461 479 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 FBXO22Q8NEZ5 403 aa22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 NAP1L2Q9ULW6 460 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-220ENST00000505307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 CDC27P30260 824 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 ZNF76P36508 570 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 CLK2P49760 499 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 SLC26A2P50443 739 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 ACTR2P61160 394 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 PFKFB3Q16875 520 aaPredicted RBP22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 MARCH8Q5T0T0 291 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 CYP2W1Q8TAV3 490 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 CCDC12Q8WUD4 166 aaPredicted RBP22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 PCYT2Q99447 389 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 OSBPL7Q9BZF2 842 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 AGO4Q9HCK5 861 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 SQORQ9Y6N5 450 aa22.77■■□□□ 1.24
UBE2D3-220ENST00000505307 MUC3AQ02505 3323 aa22.77■■□□□ 1.23
UBE2D3-220ENST00000505307 ESYT2A0FGR8 921 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 ARP10275 920 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 SCG2P13521 617 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 INSRRP14616 1297 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 HSPA4P34932 840 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 STAT5BP51692 787 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 MGAT3Q09327 533 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 IER5Q5VY09 327 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 BLOC1S2Q6QNY1 142 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 DNAJB3Q8WWF6 145 aa22.76■■□□□ 1.23
UBE2D3-220ENST00000505307 COL4A6Q14031 1691 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 UPP2O95045 317 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 REC8O95072 547 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 ATG7O95352 703 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 GHRP10912 638 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 PSMA5P28066 241 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 ADD1P35611 737 aaKnown RBP22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 PTPROQ16827 1216 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 FAM43BQ6ZT52 329 aaPredicted RBP22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 Q6ZUG5 572 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 PGBD1Q96JS3 809 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 JAKMIP1Q96N16 626 aaKnown RBP22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 C17orf80Q9BSJ5 609 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 TRPC6Q9Y210 931 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 SIP14410 1827 aa22.75■■□□□ 1.23
UBE2D3-220ENST00000505307 CYP3A4P08684 503 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 IGBP1P78318 339 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 MRPS6P82932 125 aaKnown RBP22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 APOBRQ0VD83 1088 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 ITGB3BPQ13352 177 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 LPIN1Q14693 890 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 EPC2Q52LR7 807 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 FBXO47Q5MNV8 452 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 TSHZ1Q6ZSZ6 1077 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 BRF1Q92994 677 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 IL17RAQ96F46 866 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 ZMYND12Q9H0C1 365 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 C6orf50Q9HD87 102 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 PCDHA2Q9Y5H9 948 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 SNX14Q9Y5W7 946 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 CDY2AQ9Y6F7 541 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 COL4A4P53420 1690 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 NID2Q14112 1375 aa22.74■■□□□ 1.23
UBE2D3-220ENST00000505307 XIRP2A4UGR9 3374 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 M0QZ92 97 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 PRPF3O43395 683 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 GNA11P29992 359 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 KCNQ1P51787 676 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 PLCB4Q15147 1175 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 NME8Q8N427 588 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 MRPL38Q96DV4 380 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 AGXT2Q9BYV1 514 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 TMEM260Q9NX78 707 aa22.73■■□□□ 1.23
UBE2D3-220ENST00000505307 REV3LO60673 3130 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 IGKV6D-21A0A0A0MT36 114 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 POTEB3A0JP26 581 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 H3BNC9 293 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 EPB41L2O43491 1005 aaKnown RBP22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 AKAP17AQ02040 695 aaKnown RBP22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 JAKMIP3Q5VZ66 844 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 FAM160B1Q5W0V3 765 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 POTEBQ6S5H4 581 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 PLA2G4DQ86XP0 818 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 TMEM192Q8IY95 271 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 FTHL17Q9BXU8 183 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 RWDD3Q9Y3V2 267 aa22.72■■□□□ 1.23
UBE2D3-220ENST00000505307 SMIM35A0A1B0GVV1 85 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 ENPP3O14638 875 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 RPS6KB1P23443 525 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 SETQ01105 290 aaPredicted RBP22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 TIGD5Q53EQ6 642 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 REXO1Q8N1G1 1221 aaKnown RBP22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 FIBCD1Q8N539 461 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 BICD2Q8TD16 824 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms