RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 BCAS4Q8TDM0 211 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
DDX41-205ENST00000505081 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 PODXL2Q9NZ53 605 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 RSPH10B2B2RC85 870 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 OPA1O60313 960 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 RSPH10BP0C881 870 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 MYBP10242 640 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 GCFC2P16383 781 aaKnown RBP17.59■□□□□ 0.41
DDX41-205ENST00000505081 SFR1Q86XK3 245 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 NUCKS1Q9H1E3 243 aaKnown RBP17.59■□□□□ 0.41
DDX41-205ENST00000505081 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 SAMM50Q9Y512 469 aa17.59■□□□□ 0.41
DDX41-205ENST00000505081 ZNF233A6NK53 670 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 CETN3O15182 167 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 RAD51CO43502 376 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 BBOX1O75936 387 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 CYP4A11Q02928 519 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 DDR1Q08345 913 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 DCAF17Q5H9S7 520 aaPredicted RBP17.58■□□□□ 0.41
DDX41-205ENST00000505081 GPATCH4Q5T3I0 446 aaKnown RBP17.58■□□□□ 0.41
DDX41-205ENST00000505081 DPY19L2P1Q6NXN4 242 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 GJB7Q6PEY0 223 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 AIPL1Q9NZN9 384 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 FOCADQ5VW36 1801 aa17.58■□□□□ 0.41
DDX41-205ENST00000505081 KCNK3O14649 394 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 MARSP56192 900 aaKnown RBP17.58■□□□□ 0.4
DDX41-205ENST00000505081 KCNA1Q09470 495 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 GIT2Q14161 759 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 IRF2BP2Q7Z5L9 587 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 PACS2Q86VP3 889 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 PIK3R5Q8WYR1 880 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 REEP2Q9BRK0 252 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 TSKSQ9UJT2 592 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 MYH4Q9Y623 1939 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 GNA14O95837 355 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 CASP4P49662 377 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 NNTQ13423 1086 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.4
DDX41-205ENST00000505081 USH1GQ495M9 461 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 ALS2CLQ60I27 953 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
DDX41-205ENST00000505081 RUBCNQ92622 972 aa17.58■□□□□ 0.4
DDX41-205ENST00000505081 MEIS2O14770 477 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 EIF3HO15372 352 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX41-205ENST00000505081 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
DDX41-205ENST00000505081 TNFRSF8P28908 595 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 MAGEA9P43362 315 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 NOP2P46087 812 aaKnown RBP17.57■□□□□ 0.4
DDX41-205ENST00000505081 SPAG5Q96R06 1193 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 KCNQ5Q9NR82 932 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 SFI1A8K8P3 1242 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 CLIC2O15247 247 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 UCHL3P15374 230 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 POLD1P28340 1107 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 SPIRE1Q08AE8 756 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 GLE1Q53GS7 698 aaKnown RBP17.57■□□□□ 0.4
DDX41-205ENST00000505081 CFAP58Q5T655 872 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 TCERG1LQ5VWI1 586 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 IQCKQ8N0W5 287 aa17.57■□□□□ 0.4
DDX41-205ENST00000505081 AKAP3O75969 853 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 SPATA31C1P0DKV0 1188 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 ARHGAP4P98171 946 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 DDX42Q86XP3 938 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX41-205ENST00000505081 USP38Q8NB14 1042 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 CYP2W1Q8TAV3 490 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 AP1M1Q9BXS5 423 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 LUC7LQ9NQ29 371 aaKnown RBP17.56■□□□□ 0.4
DDX41-205ENST00000505081 ARMCX3Q9UH62 379 aaPredicted RBP17.56■□□□□ 0.4
DDX41-205ENST00000505081 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 FRMD3A2A2Y4 597 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 PON1P27169 355 aa17.56■□□□□ 0.4
DDX41-205ENST00000505081 FAM86B1E9PN63 330 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
DDX41-205ENST00000505081 FAM86B2P0C5J1 330 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 EPB41P11171 864 aaKnown RBP17.55■□□□□ 0.4
DDX41-205ENST00000505081 PAK2Q13177 524 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 APOBEC3HQ6NTF7 200 aaKnown RBP17.55■□□□□ 0.4
DDX41-205ENST00000505081 ZC3H3Q8IXZ2 948 aaKnown RBP17.55■□□□□ 0.4
DDX41-205ENST00000505081 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 CEP104O60308 925 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 ZEB2O60315 1214 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 RPS6KA1Q15418 735 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 ARHGAP27Q6ZUM4 889 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
DDX41-205ENST00000505081 HOXA13P31271 388 aaPredicted RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 ERVK-9P63128 1117 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 KNOP1Q1ED39 458 aaKnown RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 EDRF1Q3B7T1 1238 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 USP21Q9UK80 565 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 AFPP02771 609 aaKnown RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 USP11P51784 963 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 GUCY1A3Q02108 690 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 EXOC3L4Q17RC7 722 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 TAF4BQ92750 862 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms