RNA–Protein interactions for RNA: ENST00000504968.6

SEC24B-203, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-203ENST00000504968 CACNA2D3Q8IZS8 1091 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 CASKIN2Q8WXE0 1202 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 PIDD1Q9HB75 910 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 GMNCA6NCL1 334 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 EPHB6O15197 1021 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 MAGOHP61326 146 aaKnown RBP13.17□□□□□ -0.3
SEC24B-203ENST00000504968 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
SEC24B-203ENST00000504968 ALX1Q15699 326 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 MGARPQ8TDB4 240 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 AGAP11Q8TF27 550 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 MAGOHBQ96A72 148 aaKnown RBP13.17□□□□□ -0.3
SEC24B-203ENST00000504968 TMEM87BQ96K49 555 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
SEC24B-203ENST00000504968 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 GDF11O95390 407 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 CDK8P49336 464 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 RNASELQ05823 741 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 EHHADHQ08426 723 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 NFIAQ12857 509 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 APOBEC3HQ6NTF7 200 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ATP6V1G3Q96LB4 118 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 MTRQ99707 1265 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 NLRC4Q9NPP4 1024 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 HERC5Q9UII4 1024 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 CTNNA1P35221 906 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ELF3P78545 371 aaPredicted RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 UIMC1Q96RL1 719 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 SEC63Q9UGP8 760 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ERFP50548 548 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 SKOR1P84550 965 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ADGRA1Q86SQ6 560 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 RIOK1Q9BRS2 568 aaKnown RBP13.16□□□□□ -0.3
SEC24B-203ENST00000504968 DPH5Q9H2P9 285 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
SEC24B-203ENST00000504968 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 ICA1Q05084 483 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 TACC1O75410 805 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 MMP1P03956 469 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 CYLC1P35663 651 aaPredicted RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 KRT83P78385 493 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 NTRK3Q16288 839 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 KDM7AQ6ZMT4 941 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 ZNF570Q96NI8 536 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 ELAC2Q9BQ52 826 aaKnown RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 ASNSP08243 561 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
SEC24B-203ENST00000504968 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 GNAQP50148 359 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 PTGDRQ13258 359 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 C3orf20Q8ND61 904 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
SEC24B-203ENST00000504968 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 EVI5O60447 810 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
SEC24B-203ENST00000504968 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
SEC24B-203ENST00000504968 ITGB3BPQ13352 177 aaPredicted RBP13.14□□□□□ -0.31
SEC24B-203ENST00000504968 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 TRPM4Q8TD43 1214 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 SPAG5Q96R06 1193 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 GAKO14976 1311 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 EP400Q96L91 3159 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
SEC24B-203ENST00000504968 SHBGP04278 402 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CALM1P0DP23 149 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CALM2P0DP24 149 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CALM3P0DP25 149 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 COPB2P35606 906 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 TUBB4BP68371 445 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 KRT71Q3SY84 523 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 IQCKQ8N0W5 287 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
SEC24B-203ENST00000504968 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms