RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 SLC28A3Q9HAS3 691 aa6.72□□□□□ -1.33
SPOP-208ENST00000504889 GJB4Q9NTQ9 266 aa6.72□□□□□ -1.33
SPOP-208ENST00000504889 DDX25Q9UHL0 483 aaKnown RBP6.72□□□□□ -1.33
SPOP-208ENST00000504889 GINS2Q9Y248 185 aa6.72□□□□□ -1.33
SPOP-208ENST00000504889 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
SPOP-208ENST00000504889 EMSYQ7Z589 1322 aa6.72□□□□□ -1.33
SPOP-208ENST00000504889 RANBP2P49792 3224 aaKnown RBP6.71□□□□□ -1.33
SPOP-208ENST00000504889 TANC1Q9C0D5 1861 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 IGLV3-22A0A075B6J6 115 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 POTEB3A0JP26 581 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 RRN3P2A6NIE6 340 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 WDR64B1ANS9 1081 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 ADAMTS3O15072 1205 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 JAK2O60674 1132 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 BAG4O95429 457 aaKnown RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 SLC34A2O95436 690 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 TDP2O95551 362 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 HOXD8P13378 290 aaPredicted RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 INSRRP14616 1297 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 ATP2A2P16615 1042 aaKnown RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 ATP2B1P20020 1258 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 SLC26A2P50443 739 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 IKBKEQ14164 716 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 RAB30Q15771 203 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 ZNF746Q6NUN9 644 aaPredicted RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 TAF2Q6P1X5 1199 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 CNKSR3Q6P9H4 555 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 POTEBQ6S5H4 581 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 MIER3Q7Z3K6 550 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 SERINC5Q86VE9 423 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 SMAP1Q8IYB5 467 aaPredicted RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 FAM177A1Q8N128 213 aaPredicted RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 DAGLBQ8NCG7 672 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 NSUN7Q8NE18 718 aaKnown RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 DNAJB3Q8WWF6 145 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 HERVK_113Q902F9 699 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 TIFAQ96CG3 184 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 C8orf76Q96K31 380 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 CCDC43Q96MW1 224 aaKnown RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 SCLT1Q96NL6 688 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.34
SPOP-208ENST00000504889 GABBR1Q9UBS5 961 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 KIF3AQ9Y496 699 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 GTF3C3Q9Y5Q9 886 aa6.71□□□□□ -1.34
SPOP-208ENST00000504889 SCN10AQ9Y5Y9 1956 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 MSH4O15457 936 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 TLL1O43897 1013 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 HBP1O60381 514 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 EFCAB14O75071 495 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 LGR5O75473 907 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 BAIAP3O94812 1187 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 CTDNEP1O95476 244 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 CCNE2O96020 404 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 MMP1P03956 469 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 AMHP03971 560 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 SFNP31947 248 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 RBM25P49756 843 aaKnown RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 JAK3P52333 1124 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 RABGGTBP53611 331 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 HMGN5P82970 282 aaKnown RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 TMEM62Q0P6H9 643 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 NR5A1Q13285 461 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 HIC1Q14526 733 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 PLCB4Q15147 1175 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 IER5Q5VY09 327 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 PPP2R2DQ66LE6 453 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 KRT40Q6A162 431 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 NCAPH2Q6IBW4 605 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 FAM109BQ6ICB4 259 aaPredicted RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 GPR153Q6NV75 609 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 C16orf59Q7L2K0 433 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 PLPPR4Q7Z2D5 763 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 CCDC60Q8IWA6 550 aaPredicted RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 DIS3L2Q8IYB7 885 aaKnown RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 MYOCDQ8IZQ8 938 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 METTL13Q8N6R0 699 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 OXER1Q8TDS5 423 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 TRAPPC12Q8WVT3 735 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 SEPT8Q92599 483 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 DHX38Q92620 1227 aaKnown RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 WNT8BQ93098 351 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 GJA10Q969M2 543 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 GAS2L1Q99501 681 aaPredicted RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 PBX4Q9BYU1 374 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 DISC1Q9NRI5 854 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 NRBP2Q9NSY0 501 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 CXXC1Q9P0U4 656 aaPredicted RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 SEPT9Q9UHD8 586 aaPredicted RBP6.7□□□□□ -1.34
SPOP-208ENST00000504889 CEP131Q9UPN4 1083 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 PCDHA10Q9Y5I2 948 aa6.7□□□□□ -1.34
SPOP-208ENST00000504889 CEP290O15078 2479 aa6.69□□□□□ -1.34
SPOP-208ENST00000504889 BTBD18B2RXH4 712 aa6.69□□□□□ -1.34
SPOP-208ENST00000504889 H3BQV1 296 aa6.69□□□□□ -1.34
SPOP-208ENST00000504889 NEMFO60524 1076 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms