RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 ZNF174Q15697 407 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 SMAD2Q15796 467 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 MLANAQ16655 118 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 FAM26EQ8N5C1 309 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 COG1Q8WTW3 980 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 YIPF4Q9BSR8 244 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 ACSS2Q9NR19 701 aa7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 TYW1Q9NV66 732 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 DDX56Q9NY93 547 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-206ENST00000504751 TEX51A0A1B0GUA7 166 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 PRAMEF25A6NGN4 478 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 ALG1L2C9J202 215 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 MMEP08473 750 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 THBS2P35442 1172 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 MC3RP41968 323 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 CACNB2Q08289 660 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 MCTP1Q6DN14 999 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 PROSER1Q86XN7 944 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 SLC5A5Q92911 643 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 ZMAT4Q9H898 229 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 SIRT5Q9NXA8 310 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
TRAPPC13-206ENST00000504751 FOXP2O15409 715 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 SEMA7AO75326 666 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 CYP17A1P05093 508 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 ATF2P15336 505 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 IGFBP6P24592 240 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 AOAHP28039 575 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 FNTBP49356 437 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 EPHB3P54753 998 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 NCKAP1LP55160 1127 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 PHC1P78364 1004 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 DBPQ10586 325 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 FAM50AQ14320 339 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 TERF2Q15554 542 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 DDB1Q16531 1140 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 CD276Q5ZPR3 534 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 IGDCC3Q8IVU1 814 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 ASB15Q8WXK1 588 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 SCYL1Q96KG9 808 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 C16orf92Q96LL3 132 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 TOMM22Q9NS69 142 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 HOMER2Q9NSB8 354 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 SLC5A4Q9NY91 659 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 RBPJLQ9UBG7 517 aa7.65□□□□□ -1.18
TRAPPC13-206ENST00000504751 NCAM1P13591 858 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 GUCY2FP51841 1108 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 TARBP2Q15633 366 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 GPR158Q5T848 1215 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 BROXQ5VW32 411 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 ZC3H18Q86VM9 953 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 CLRN3Q8NCR9 226 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 MZB1Q8WU39 189 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 GCM1Q9NP62 436 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 WASF3Q9UPY6 502 aa7.64□□□□□ -1.19
TRAPPC13-206ENST00000504751 ULK1O75385 1050 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 PRKD3O94806 890 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 HSP90B1P14625 803 aaKnown RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 NKX3-2P78367 333 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 LRRC32Q14392 662 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 EPHA7Q15375 998 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 BRDTQ58F21 947 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 LIPIQ6XZB0 460 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 HDGFL2Q7Z4V5 671 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 B3GNT8Q7Z7M8 397 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 RTN4RL1Q86UN2 441 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 FOXRED1Q96CU9 486 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 SGPP1Q9BX95 441 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 TRIM8Q9BZR9 551 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 MS4A5Q9H3V2 200 aa7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 NGRNQ9NPE2 291 aaKnown RBP7.63□□□□□ -1.19
TRAPPC13-206ENST00000504751 N4BP3O15049 544 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 KATNA1O75449 491 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 PDGFRBP09619 1106 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 TMEM253P0C7T8 217 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 CYP2C8P10632 490 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 SESN3P58005 492 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 MTMR1Q13613 665 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 CD300LDQ6UXZ3 194 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 FERMT3Q86UX7 667 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 PASD1Q8IV76 773 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 ZNF610Q8N9Z0 462 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 SMARCC2Q8TAQ2 1214 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 GBP4Q96PP9 640 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 SYT3Q9BQG1 590 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 PUS7LQ9H0K6 701 aaKnown RBP7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 VTA1Q9NP79 307 aa7.62□□□□□ -1.19
TRAPPC13-206ENST00000504751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 ZNF839A8K0R7 811 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 K7ESF4 209 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 MPIG6BO95866 241 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 MC4RP32245 332 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 EXOSC10Q01780 885 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 CILP2Q8IUL8 1156 aa7.61□□□□□ -1.19
TRAPPC13-206ENST00000504751 ZZZ3Q8IYH5 903 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms