RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PPP2R2DQ66LE6 453 aa28.82■■■□□ 2.2
PVT1-201ENST00000504719 CPLX2Q6PUV4 134 aaKnown RBP28.82■■■□□ 2.2
PVT1-201ENST00000504719 PLPPR4Q7Z2D5 763 aa28.82■■■□□ 2.2
PVT1-201ENST00000504719 KIF2CQ99661 725 aa28.82■■■□□ 2.2
PVT1-201ENST00000504719 UPF2Q9HAU5 1272 aaKnown RBP28.82■■■□□ 2.2
PVT1-201ENST00000504719 CHD9Q3L8U1 2897 aa28.82■■■□□ 2.2
PVT1-201ENST00000504719 KIF28PB7ZC32 967 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 DHX15O43143 795 aaKnown RBP28.81■■■□□ 2.2
PVT1-201ENST00000504719 EFCAB14O75071 495 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 CTSHP09668 335 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 CIITAP33076 1130 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 NLRP5P59047 1200 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 DEFB103AP81534 67 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 SETQ01105 290 aaPredicted RBP28.81■■■□□ 2.2
PVT1-201ENST00000504719 PLEKHG4Q58EX7 1191 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 FAM26DQ5JW98 314 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 RUFY4Q6ZNE9 571 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 RPAINQ86UA6 219 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 DBF4BQ8NFT6 615 aa28.81■■■□□ 2.2
PVT1-201ENST00000504719 GAS2L1Q99501 681 aaPredicted RBP28.81■■■□□ 2.2
PVT1-201ENST00000504719 SLKQ9H2G2 1235 aaPredicted RBP28.81■■■□□ 2.2
PVT1-201ENST00000504719 MBLAC1A4D2B0 266 aaPredicted RBP28.8■■■□□ 2.2
PVT1-201ENST00000504719 DDX39AO00148 427 aaKnown RBP28.8■■■□□ 2.2
PVT1-201ENST00000504719 CCNE2O96020 404 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 CA3P07451 260 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 STAT5BP51692 787 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 SCRN1Q12765 414 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 MARCH8Q5T0T0 291 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 TAF2Q6P1X5 1199 aa28.8■■■□□ 2.2
PVT1-201ENST00000504719 SIP14410 1827 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 IGKV6D-21A0A0A0MT36 114 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 RRN3P2A6NIE6 340 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 IPO5O00410 1097 aaKnown RBP28.79■■■□□ 2.2
PVT1-201ENST00000504719 EDIL3O43854 480 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 PFKFB2O60825 505 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 INSRRP14616 1297 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 PLCB4Q15147 1175 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 ABHD15Q6UXT9 468 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 ZNF577Q9BSK1 485 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 OSBPL7Q9BZF2 842 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 TUBE1Q9UJT0 475 aa28.79■■■□□ 2.2
PVT1-201ENST00000504719 EYSQ5T1H1 3165 aa28.78■■■□□ 2.2
PVT1-201ENST00000504719 MKRN4PQ13434 485 aaPredicted RBP28.78■■■□□ 2.2
PVT1-201ENST00000504719 TMCO2Q7Z6W1 182 aaPredicted RBP28.78■■■□□ 2.2
PVT1-201ENST00000504719 TNPO1Q92973 898 aaKnown RBP28.78■■■□□ 2.2
PVT1-201ENST00000504719 UIMC1Q96RL1 719 aa28.78■■■□□ 2.2
PVT1-201ENST00000504719 TBC1D22BQ9NU19 505 aa28.78■■■□□ 2.2
PVT1-201ENST00000504719 PCDHA4Q9UN74 947 aa28.78■■■□□ 2.2
PVT1-201ENST00000504719 MYH9P35579 1960 aaKnown RBP28.78■■■□□ 2.2
PVT1-201ENST00000504719 WDR81Q562E7 1941 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 TLL1O43897 1013 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 IGBP1P78318 339 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 ADGRE1Q14246 886 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 PRR16Q569H4 304 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 FAM177A1Q8N128 213 aaPredicted RBP28.77■■■□□ 2.2
PVT1-201ENST00000504719 SEPT8Q92599 483 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 LENG9Q96B70 501 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 AIFM3Q96NN9 605 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 TRPC6Q9Y210 931 aa28.77■■■□□ 2.2
PVT1-201ENST00000504719 LARGE1O95461 756 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 CHRNA1P02708 482 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 SLC26A2P50443 739 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 USP11P51784 963 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 MGAT3Q09327 533 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 ME3Q16798 604 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 RSPH3Q86UC2 560 aa28.76■■■□□ 2.19
PVT1-201ENST00000504719 M0R2N6 131 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 CDKL5O76039 1030 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 ARHGEF15O94989 841 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 GJB5O95377 273 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 FAM160B1Q5W0V3 765 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.75■■■□□ 2.19
PVT1-201ENST00000504719 BLIDQ8IZY5 108 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 NECAB1Q8N987 351 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 DAGLBQ8NCG7 672 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 DNAJB3Q8WWF6 145 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 CHD7Q9P2D1 2997 aa28.75■■■□□ 2.19
PVT1-201ENST00000504719 POTEB3A0JP26 581 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 BACH1O14867 736 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 TAP1Q03518 808 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 NPY5RQ15761 445 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 GALNT17Q6IS24 598 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 ZNF746Q6NUN9 644 aaPredicted RBP28.74■■■□□ 2.19
PVT1-201ENST00000504719 MIS18BP1Q6P0N0 1132 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 POTEBQ6S5H4 581 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 CCDC60Q8IWA6 550 aaPredicted RBP28.74■■■□□ 2.19
PVT1-201ENST00000504719 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.74■■■□□ 2.19
PVT1-201ENST00000504719 TBCKQ8TEA7 893 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 ZBTB10Q96DT7 871 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 ZBED2Q9BTP6 218 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 ZNF302Q9NR11 478 aa28.74■■■□□ 2.19
PVT1-201ENST00000504719 STK36Q9NRP7 1315 aa28.73■■■□□ 2.19
PVT1-201ENST00000504719 TRAPPC12Q8WVT3 735 aa28.73■■■□□ 2.19
PVT1-201ENST00000504719 APBB2Q92870 758 aa28.73■■■□□ 2.19
PVT1-201ENST00000504719 LOXHD1Q8IVV2 1947 aa28.73■■■□□ 2.19
PVT1-201ENST00000504719 AMHP03971 560 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 RPLP2P05387 115 aaKnown RBP28.72■■■□□ 2.19
PVT1-201ENST00000504719 KRT76Q01546 638 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 SWSAP1Q6NVH7 229 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 SMAP1Q8IYB5 467 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms